| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3992 |
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| Symbol | |
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| ID | 8134979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4504885 |
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| End bp | 4506042 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867299 |
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| Product | amidohydrolase |
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| Protein accession | YP_003019543 |
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| Protein GI | 253690353 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCG CACCCCAGCA TGAGCCCCTG GCTCAGTTTA TTCAGGCATT TCGCCACGAT
TTACACCGCA ATCCTGAGCT GTCGAATCAG GAGTTTGAGA CGACGAAGAA AATTCGTGCG
GTATTAGAAA AAGAGGGGAT TCGCATCCTC GATCTGCCGT TGAAAACCGG TCTGGTCGCG
GAAGTCGGCG GTCTACAGGA TGGCCCGCTG GTCGTGGTGC GTTCTGATAT CGACGCCCTG
CCGATTGAAG AAGAGTCTGG CGTAGAATTT ACGTCACTCA ATAAAGGGGT GATGCACGCC
TGCGGCCATG ATTTTCACTC GTCCGCTGCG CTGGGCGCGG CGATTCTGCT GAAGAAAATC
GAGCCAGAGC TGAAAGGCAC GGTGCGTATT TTATTCCAGG CGGCTGAAGA AACGGGGCTG
GGCGCACCGG AAGTTATCGC CGTTGGTGCG TTGGACAATG CGGTAGCGAT TTTCGGTATC
CACAACGATC CAACGCTGCC TGTTGGCGTC ATCGGTGGGA AAGACGGCGC GTTGACGGCG
GGCGTTGACC GTTTTGAGAT CAAGATTGCG GCGAAAGGCT GCCACGCGGC GAAACCGCAT
GAAGGCAACG ATCCGATTAT CATTCTGGGT CAGCTGATTT CTGCCGTACA GACCATCATC
AGCCGCACGG TGTCGTCTGA CAACAACGCG GTGGTGTCGA TTACTCAGGT TCATAGCGGC
AGCACCTGGA ACGTTATCCC TGATACCGCC TACGTTGAAG GTACGGTGAG AACGTTCAAT
CAGGACGCGC GTGATTTGAT TGAACAGCGT TTCCGTCAGA TCGTTTCAGG TATCGCCAGT
ACTTTTGGTG CGGAAATTGA GTTCCTGTGG CACGCAGGGC CACCGTCGGT AATCAACACG
CCGGAGTGGG TTGAGTTTGC ACTGAATGTG GCAAGTGACG AAGGGTTTGA AGCACGCCGT
GTGGAAGCCA GCCCGATTGG TGAAGATTTC GCGTTCTATC AGCAGAAACT GCCGGGTACG
TTCATGATGG TCGGCTCCGG TGGACCGTAT GCGCTGCACC ACCCGAAATT CCGCGTTGAC
GATCGCGCAC TGTTCCCGAC CGCGCACTAT CTGTATCAGA TGGCGAAGCA GAGTCTGGAA
CAGCTCTCCT CTCGCTAA
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| Protein sequence | MKTAPQHEPL AQFIQAFRHD LHRNPELSNQ EFETTKKIRA VLEKEGIRIL DLPLKTGLVA
EVGGLQDGPL VVVRSDIDAL PIEEESGVEF TSLNKGVMHA CGHDFHSSAA LGAAILLKKI
EPELKGTVRI LFQAAEETGL GAPEVIAVGA LDNAVAIFGI HNDPTLPVGV IGGKDGALTA
GVDRFEIKIA AKGCHAAKPH EGNDPIIILG QLISAVQTII SRTVSSDNNA VVSITQVHSG
STWNVIPDTA YVEGTVRTFN QDARDLIEQR FRQIVSGIAS TFGAEIEFLW HAGPPSVINT
PEWVEFALNV ASDEGFEARR VEASPIGEDF AFYQQKLPGT FMMVGSGGPY ALHHPKFRVD
DRALFPTAHY LYQMAKQSLE QLSSR
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