| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3957 |
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| Symbol | glpA |
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| ID | 8134944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4465363 |
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| End bp | 4467033 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644867264 |
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| Product | sn-glycerol-3-phosphate dehydrogenase subunit A |
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| Protein accession | YP_003019508 |
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| Protein GI | 253690318 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR03377] glycerol-3-phosphate dehydrogenase, anaerobic, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAA ATACTGGGAA CTGGCGTGAA ACTGACGTGG TTGTCATCGG CGGAGGTGCG
ACGGGAGCAG GTACGGCACG GGATTGCGCC CTGCGTGGAC TGCGCTGCCT GTTGCTTGAA
CGTTATGATA TTGCGACCGG GGCAACCGGG CGTAATCACG GCCTATTACA CAGCGGCGCC
CGCTATGCGG TTACCGATGG CGAGTCTGCC CGCGAATGCA TTGAAGAGAA TCAGATTCTC
CGGCGGATTG CCCGCCACTG TATTGAACCG ACCGACGGCC TGTTTATTAC CTTGCCGGAA
GACGATCTTG GCTGGCAGGC GCAGTTTATT GCCTCCTGCC AGCAGGCGGG GATTCGTGCT
CAAGCGATGG ACCCGCAGGA AGCGCTGCGG CTGGAACCCG CGGCTAATCC GGCGTTGATT
GGCGCGGTGC GCGTGCCGGA TGGTTCTGTC GATCCCTTTC GCCTGACGGC GGCCAACATG
ATCGATGCCT GCGAGCACGG CGCGGAAGTC TTGACCTATC ACGAGGTTAT CGGACTGATT
CGTCAGGGCG ATCGGGTTAC CGGTGTGCGC GTTTTCGACC ATAAAAAAGG TGTAGAAACA
GAAATATACG CGCAGGTGGT GGTTAACGCA GGGGGAATCT GGGGGCAACA CATTGCGGAA
TATGCCGATC TGCGCGTGCG CATGTTCCCG GCGAAAGGCG CGCTGCTGAT TCTTGGACAC
CGTATCAACA ACATGGTGAT CAATCGCTGC CGTAAACCCG CGGATGCCGA CATTCTGGTG
CCGGGCGATA CCATTTCGCT GATTGGCACG ACCTCAACCC ACATCGACTA CGACCAAATC
GACAATATGC TGGTGACGCC TGCTGAAGTG GAAACGCTGA TGCGCGAAGG ATCCATGCTG
GCACCGTCTC TGGCGAGCAC GCGAATTTTG CGCGCCTATG CTGGTGTCCG GCCGTTAGTT
GCCAACGACA GTGACCCCAG CGGGCGCAGC GTAAGTCGCG GCATTGTGCT GCTCGACCAT
GCCAGCCGCG ACGGGCTGGA AGGGTTCATT ACCATCACTG GCGGCAAGCT GATGACCTAC
CGTCTGATGG CGGAGTGGGT GACGGACGCT ATCTGCAAAA AGTTGGGCCA TGACGTGGCC
TGCTCGACGG CACAGACGCC GCTGCCCGGT TCTGAGTCGC TGGATGAGGT GAAAACCGCC
CCTCACGCCC TGTCAGCTTA TCCTGCGGCA AAACCGCTCT CCGCGCCGCT GCGCGGCTCG
GCGATTTATC GCCACGGTGA ACGTGCAGGA AGGATGCTGT CTGGTGAACG TCTGGATCGC
AGTCTGGTGT GCGAATGTGA GGCCGTGACG GCGGGAGAAG TACGCTACGC CGTGGAATCA
TTGCAGGTGA ATAACCTGAT TGACCTGCGT CGTCGTACTC GCGTTGGCAT GGGCACCTGT
CAGGGTGAAC TGTGCGCCTG TCGTGCAGCG GGTCTGCTGT GCCGGCTGGG CACCGCGACG
CCGGAGCAGT CGCTCACGCA GCTCAGCCAG TTTTTGAACG AACGCTGGAA AGGGATTCGC
CCAGTCGCGT GGGGCAATGC CCTGCGTGAA AGCGAGTTTA CCAGTTGGAT TTATCAGGGA
TTGTGCGGCC TGACGGCCAG CGACAGCCAG GAGGATCGTC ATGCGCTATG A
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| Protein sequence | MMQNTGNWRE TDVVVIGGGA TGAGTARDCA LRGLRCLLLE RYDIATGATG RNHGLLHSGA
RYAVTDGESA RECIEENQIL RRIARHCIEP TDGLFITLPE DDLGWQAQFI ASCQQAGIRA
QAMDPQEALR LEPAANPALI GAVRVPDGSV DPFRLTAANM IDACEHGAEV LTYHEVIGLI
RQGDRVTGVR VFDHKKGVET EIYAQVVVNA GGIWGQHIAE YADLRVRMFP AKGALLILGH
RINNMVINRC RKPADADILV PGDTISLIGT TSTHIDYDQI DNMLVTPAEV ETLMREGSML
APSLASTRIL RAYAGVRPLV ANDSDPSGRS VSRGIVLLDH ASRDGLEGFI TITGGKLMTY
RLMAEWVTDA ICKKLGHDVA CSTAQTPLPG SESLDEVKTA PHALSAYPAA KPLSAPLRGS
AIYRHGERAG RMLSGERLDR SLVCECEAVT AGEVRYAVES LQVNNLIDLR RRTRVGMGTC
QGELCACRAA GLLCRLGTAT PEQSLTQLSQ FLNERWKGIR PVAWGNALRE SEFTSWIYQG
LCGLTASDSQ EDRHAL
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