Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3956 |
Symbol | |
ID | 8134943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4464111 |
End bp | 4465373 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644867263 |
Product | anaerobic glycerol-3-phosphate dehydrogenase subunit B |
Protein accession | YP_003019507 |
Protein GI | 253690317 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3075] Anaerobic glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | [TIGR03378] glycerol-3-phosphate dehydrogenase, anaerobic, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTATG ACGTTGTGAT TATCGGCGGA GGACTGGCGG GGCTGACCTG CGGTATTCGT CTGGCGGAGC AGGGGAAACG TTGCGCAATT GTCAGCGCTG GGCAGAATGC GCTGCATTTT TCTTCCGGTG CGCTGGATTT ACTCTCCCAT CTCCCCGACG GACAGCCTGT GAGCCAGCCG CTTGAGGCGC TGGATGAGCT GGCGCGTCAG GCTCCTCACC ACCCTTATTC GCGCATGGGA GCGGCGGCGG TTGCCGCACT GTTGCCACAG GTCGAAGCAT TGCTGGAGCG CAGCACTATC TCCCTGTTGG GCAGCTATCA GCAGAATCAC TGGCGTATGA CGCCGTTAGG TAAGTTTCGC GCATGCTGGC TGAGCCCGGT TGATGGCGTA ACGCGTGGCC TGCCGGATTC CCGTTTTGGT GATAACCCGC TCATTGCCGG TATCGAAGGT TTTTTGGATT TTCAGTCCCG AATTGTTGCC GGTACGCTCC AGGCGCAGGG GATCGCGGCG CGCAGTGATG ACCTCAAGCT GCCGGTGCTG GATCGGTTAC GCCAAAACCC CAGTGAATTC CGTGCGGTAA ATATCGCCCG CGTGCTCGAC CGACCAGAAA ACCGCGCGGC GCTGGTGGAG GAACTGTCGC TTCTGGCCAA CGGTAACGAT GCCATCATCA TGCCCGCCTG TCTGGGGTTG GATAGTCCCG AGGTGGTGGG TGAGCTCGCT GAGGCGCTAG GTAAACCGAT ATCGCTGTTG CCGACCTTAC CACCGTCAGT TCTCGGATTG CGCTTGCATC AGGCGCTGTC GCAGCGCTTT CGTCAGTTGG GTGGCATGGT AATGCCGGGC GACCGCGCGG TGCGTGCATC GCTGTCGGCG CAGGAGATTG CCGTTCATAG CCACCATCAC CGTGATATTC CGCTACGGGC GAAGTACGCG GTGCTGGCGA GCGGCAGCTT CTTCAGTAAC GGGCTGGTGA CGCAGTTCGA TCGGGTGACA GAGCCAGTCT TTGGGCTGGA TGTTCGGTTT GCGGAGCAGC GCGAAGGCTG GAGCCAGCAG GACGTGTTTG TGCCGCAGCC CTATATGCAG TTTGGGGCGA TCGTTGATGA ACACCTCCAC CCGCGTATTG GGGGGGAAAC GATCGGCAAT CTGTACGCCA TCGGCGCGGT GCTGGAAGGC TTCGACCCGA TTGCGCAGGG ATGTGGCGCC GGGGTGTCCT TGCTTAGCGC ACTGCATGTT GCCGAACAGA TTTTGAAGGA GGGCAACCTA TGA
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Protein sequence | MRYDVVIIGG GLAGLTCGIR LAEQGKRCAI VSAGQNALHF SSGALDLLSH LPDGQPVSQP LEALDELARQ APHHPYSRMG AAAVAALLPQ VEALLERSTI SLLGSYQQNH WRMTPLGKFR ACWLSPVDGV TRGLPDSRFG DNPLIAGIEG FLDFQSRIVA GTLQAQGIAA RSDDLKLPVL DRLRQNPSEF RAVNIARVLD RPENRAALVE ELSLLANGND AIIMPACLGL DSPEVVGELA EALGKPISLL PTLPPSVLGL RLHQALSQRF RQLGGMVMPG DRAVRASLSA QEIAVHSHHH RDIPLRAKYA VLASGSFFSN GLVTQFDRVT EPVFGLDVRF AEQREGWSQQ DVFVPQPYMQ FGAIVDEHLH PRIGGETIGN LYAIGAVLEG FDPIAQGCGA GVSLLSALHV AEQILKEGNL
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