| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3948 |
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| Symbol | |
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| ID | 8134935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4454696 |
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| End bp | 4455520 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867255 |
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| Product | Cof-like hydrolase |
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| Protein accession | YP_003019499 |
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| Protein GI | 253690309 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTTA AATTGCTGGC TATCGATCTG GATGGCACGT TGCTGACGTC ACAAAAAGCA
GTGACACCAG CGACATGCAG AATATTGCAA GAGGCTCTGG AAAAGGGCAT CCATGTGGCG
CTGGTTTCTG GCCGGACGCT GCCCAGCGTA TTGCAAATCA TGGATCAGCT AGGGCTAGTT
GGTTCTCGCT GCTGGGCTAT CGCCTGCAAC GGTGCGTTGA TCTGGAGTCA GGAAAAATCC
GCCATGATTA GCGCCAGCGT TCTGGATCAT GACGATATTC TGACGTTGAC GCATTTTGGC
CACAGTCTGA ATCTGGAATG CTACCAAATT GATGGGCAGC AGTTGGTTGC CAGCAGGCCT
GTTCTCTCTG ATGCGGGTGC CTTGCGGTAT TGCCGTATGC CGGTGGTTAT CCTTCCGCCA
GATTGGGAAA CCCATTCCCG ACGACAGACG CCAAAAATGA TGTTTGTTGA GGGACGAACC
ACGATAGATG CATTGGCCGG GCGTATCCCT CCGTCGCTTT CTCGTCGTTA TTATTTTGTG
CGCAGCGAAC CTAACTATTT TGAAGTCATG CAGCGGGGCG TTAACAAAGG CACTGCCTGC
CAGACGCTGG CCCACTATCT CGCGATTCCA CCCGCAGCTA TTCTGGCGAT CGGCGATGAA
GAGAATGATA GAGAAATGTT AGCGTTCGCC GGTACGGGGA TCGCGATGGG GAATGCGGTG
CCAAAGATTA AAGCCATGGC AGACTGGGTA ACGACAAATA ATGACAAAGA AGGCGTAGCC
GTTGCGCTTC AACGCTACCT TACCCTGACC GGGGACTCGT GTTGA
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| Protein sequence | MEFKLLAIDL DGTLLTSQKA VTPATCRILQ EALEKGIHVA LVSGRTLPSV LQIMDQLGLV
GSRCWAIACN GALIWSQEKS AMISASVLDH DDILTLTHFG HSLNLECYQI DGQQLVASRP
VLSDAGALRY CRMPVVILPP DWETHSRRQT PKMMFVEGRT TIDALAGRIP PSLSRRYYFV
RSEPNYFEVM QRGVNKGTAC QTLAHYLAIP PAAILAIGDE ENDREMLAFA GTGIAMGNAV
PKIKAMADWV TTNNDKEGVA VALQRYLTLT GDSC
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