| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3918 |
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| Symbol | |
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| ID | 8134905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4412904 |
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| End bp | 4413596 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644867225 |
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| Product | ABC transporter related |
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| Protein accession | YP_003019469 |
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| Protein GI | 253690279 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.333313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGGAGT TATTGATTCA ACACCTGAGT GTGACCTTCC CCGATACGTC CGAGGCTGTT
CTGGATATTC CTGCGCTGTC GATTCGTTCT GGCGAACGGG TCGCGGTGAT GGGGCCTTCC
GGTTCCGGTA AAACCACGCT GGTGAATGCC ATCACCGGGA TGGATCACAG TGGAACAGGT
CATGTGCAGT GGGAAAAGCA AGATATCTGG CAGATGAACG AAGCGGAACG CGACCGCTGG
CGGGCACAGC ATATCGGGCT GGTGATGCAG GATTTTCACC TTTTCCCCGG TCTGAATGCG
CTGGAAAATG TCCTACTGCC TGCGCAGTTT CACCACTGGC GGATACCCGC GTCGCTCAGG
CAGCGGGCGG CGGATTTGCT GGCACAGGTG GGGCTGAATA CCGCGAAACG TCCGATTGAA
GTGCTATCAC GCGGCGAGAA GCAGCGGGTT GCCGTCGCAA GAGCGCTGCT CAGCCAGCCC
GACATCATCG TTGCCGATGA ACCCACGGCG AGTCTGGACG CGCATAGCGG TGAGCAGATT
GCCGATCTGC TGGTGACGCT GGCGCGTGAG AGTCGCGCCA CGCTTATCGC GATTACGCAC
GATGCACGTT TGGCTTCGCA AATGTCGCGC TGTATTCAAC TGGAAAAAGG ACGCCTCGTG
GCGGACACGC CGTATCAGGA GGATCGTACA TGA
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| Protein sequence | MAELLIQHLS VTFPDTSEAV LDIPALSIRS GERVAVMGPS GSGKTTLVNA ITGMDHSGTG
HVQWEKQDIW QMNEAERDRW RAQHIGLVMQ DFHLFPGLNA LENVLLPAQF HHWRIPASLR
QRAADLLAQV GLNTAKRPIE VLSRGEKQRV AVARALLSQP DIIVADEPTA SLDAHSGEQI
ADLLVTLARE SRATLIAITH DARLASQMSR CIQLEKGRLV ADTPYQEDRT
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