| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3917 |
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| Symbol | |
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| ID | 8134904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4411489 |
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| End bp | 4412907 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644867224 |
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| Product | hypothetical protein |
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| Protein accession | YP_003019468 |
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| Protein GI | 253690278 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.578149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCAT GGCGTCTTAT TTGGGTCGAC TGGCGTCGGC TCTGGCCGGG TGTGCTGGTC
GTGGTATTAC TGATCGCGAT GGCGACAGCG TTAAGTATTT CGGTGAGTTT GCAGGAAAGA
GCGCTGCGCA TGGGCAGTGC CAAAGCCGCA GATCGTTTCG ATCTGGTGAT TGGTGCGCCG
GGGAGCGAAA CGCAACTGGT GCTGTCGTCC GTGTTCCTGC AACCGTCTGC GCTGACGTTG
ATTCCCGCGC AGGTGCTGAC CGATTTGGAA AAGAACCCGC TGGTTGCCTG GGCGGCTCCG
GTCGCGTTTG GTGATTTCTA TCAGGGGATG CCGATTGTCG GCACCACGCC GCCGCTGGTC
ACGGATAACG GTAAGCGGCA GCTCACCGCC GGACGTGTAT TTAACGACGG TTTTGAGGCC
GTGGTAGGCG CGCAAACGGG GCTGACGGTG GGGAGTACAT TTAGCCCGAT TCATGGTCAG
GTGGGAACGG AAGGGGCGCA CGCGCACGAT GATGTTATCT ACACCGTGGT CGGCGTACTG
CCTGCCGACG GCAGCGCGTG GGATAAAGCG ATTCTGGTGC CGGTGAACGC AGTATGGCGG
GTGCACGGTA TCCATCCACC ACACGGCGCG GACGATGCGC ACCATGATGA CCACGACCAT
GACGATCAGG GTACTCATGA ACACGAAGGT GAACATGACG GCCATGCGCA TGATGAAATC
GCGCAGGCGG ACGGCGAACA GCACGCTGAT GAACATCACA ACGAAGCCCA TCCTGCGGAA
GGTGCTGCAA GTGATGATCC TCATGCTGAT GCCGCTCAAC CGGTAACGAC TTCACATGCC
GACGAGCATG GCGAGGAAGC AGCGCACGGG CACGCACATC AGGCGGGGTT GCCCGCTATC
GTGGTGAAAC CGAAAACGAT CGCGGGTGCT TATCAACTGC GTTCGCTGTA TCGCAGCAAC
ACGACGCTGG CGGTATTCCC CGGCGAAGTG CTGGTGAAGC TCTACTCGAT GTTGGGCGAT
ATTCGTGAAC TGCTGACCTA TATCTCGCTG GGGACGCAGG GGCTCGTGGG CGTCGCAGTG
GCGATGGTGG CGGTGATCCA CCTGCGGCAG CGACAGAAAC AGATTGGCGC ACTCCGTGCT
TTTGGCGCGC CGCGCTACGG CATTTTCACG CTGATTTGGA GCGGGCTGAT GTCGCTGGTG
AGCGTCGGCG TGCTACTGGG TGTTGGTCTG GGCTACCTTG CCGCCCGCGC AATTGCAGTG
GTCATGAGCG AAAAAAGCGG CTTTGTCCTG CCGGTGACGC TGGAATGGGA AGACATCCAC
TTCGTCCTGC TCCTGTTGCT GGTTGCTGCT GTTGTCCTGA CGATTCCGGC GATGCTGTCC
TACCGTCAAT CTCCTGCTAC GGCGCTGCGT GGGGAATAA
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| Protein sequence | MIPWRLIWVD WRRLWPGVLV VVLLIAMATA LSISVSLQER ALRMGSAKAA DRFDLVIGAP
GSETQLVLSS VFLQPSALTL IPAQVLTDLE KNPLVAWAAP VAFGDFYQGM PIVGTTPPLV
TDNGKRQLTA GRVFNDGFEA VVGAQTGLTV GSTFSPIHGQ VGTEGAHAHD DVIYTVVGVL
PADGSAWDKA ILVPVNAVWR VHGIHPPHGA DDAHHDDHDH DDQGTHEHEG EHDGHAHDEI
AQADGEQHAD EHHNEAHPAE GAASDDPHAD AAQPVTTSHA DEHGEEAAHG HAHQAGLPAI
VVKPKTIAGA YQLRSLYRSN TTLAVFPGEV LVKLYSMLGD IRELLTYISL GTQGLVGVAV
AMVAVIHLRQ RQKQIGALRA FGAPRYGIFT LIWSGLMSLV SVGVLLGVGL GYLAARAIAV
VMSEKSGFVL PVTLEWEDIH FVLLLLLVAA VVLTIPAMLS YRQSPATALR GE
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