| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3915 |
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| Symbol | |
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| ID | 8134902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4409165 |
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| End bp | 4410001 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644867222 |
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| Product | 5-keto-4-deoxyuronate isomerase |
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| Protein accession | YP_003019466 |
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| Protein GI | 253690276 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3717] 5-keto 4-deoxyuronate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.809964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTAC GACAAAGTGT ACACAGTGAA CATGCGAAAA CGCTTGATAC CACTGAGCTG
AGAAAGAAAT TTCTGATTGA GAAGATATTT ACGCCAAACC AGTACACCAT GACTTACAGC
CATATCGACC GTATTGTGGT GGGCGGAATC ATGCCAGTAG ATGGCGAGAT CACGTTTGAT
GACGGCATCG GTAAGCAATT TGGCGTGAAC TATTTTCTTG AGCGGCGCGA GCTGGGGCTG
ATCAATATCG GCGGCCCGGC CAACATCGTT ATCGACGGCA CAAGCTACCA GGTTGGCCAT
GAGGAAGCGC TCTATGTCGG AAAAGGCGCC AAAGCCTTGG CATTCAGCAG TCTGGACAAG
GCTAAGCCGG CAAAACTGTA TTATAACAGC GCACCGGCGC ATGCCGTTTA CCCGACACGC
ATCATTACGC AGGATGATGC AATCAAAGCA CCGTTGGGAG ACGTCAAAAC CTGCAACAAG
CGGACGATTT GCAAGTATCT GGTGCCGGAA GTGGTGGAAA CCTGTCAGTT GAGCATGGGA
TTAACGCGTC TGGCGGAAGG CAGCAACTGG AATTCCATGC CGACACATAC TCATGAACGC
AGAATGGAAG TGTACTTCTA TTTTGACATG GCGGAAGACA CCATTATTTT CCATATGATG
GGTGAACCGC ATGAAACGCG TCATCTGGTG CTGCATAACG AACAGGCGGT GATCTCCCCC
AGTTGGTCGA TTCACACTGG CGTCGGTACG AAAAACTACG CCTTTATCTG GGGCATGATC
GGCGAAAACC TGACGTTTGA CGATATGGAC CATATCGCGA TGCTGGATTT ACGTTAA
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| Protein sequence | MDVRQSVHSE HAKTLDTTEL RKKFLIEKIF TPNQYTMTYS HIDRIVVGGI MPVDGEITFD
DGIGKQFGVN YFLERRELGL INIGGPANIV IDGTSYQVGH EEALYVGKGA KALAFSSLDK
AKPAKLYYNS APAHAVYPTR IITQDDAIKA PLGDVKTCNK RTICKYLVPE VVETCQLSMG
LTRLAEGSNW NSMPTHTHER RMEVYFYFDM AEDTIIFHMM GEPHETRHLV LHNEQAVISP
SWSIHTGVGT KNYAFIWGMI GENLTFDDMD HIAMLDLR
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