Gene PC1_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3907 
Symbol 
ID8134894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4397476 
End bp4398357 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content45% 
IMG OID644867214 
ProductHpcH/HpaI aldolase 
Protein accessionYP_003019458 
Protein GI253690268 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACG CTAAAACCTA TCTCTTTGTG CCTGGTAATG CGCCCCACCG CTTTCAACAT 
GCCGTCAGTT GCGGGGCCGA TGCTGTGATA TTTGATTTAG AAGATGCTGT TCATCCTGAT
GAGAAAAACC AGGCCAGAGA GAATATTATC CAGTGGGATA AAAACGATAC GCCCGTCTCT
GAAATAAATT GCAAAAGATA TATACGTTTA AATAAATTTG ATTCAGTAGC GTTCAGGGAA
GACATCGAGT TTCTAAATAA ACTCAACAAT AAAGAGAAAT TAAGAAATAA TGCAAAATAC
AGACATAAAA TAGTCACATG GGAAATTGTT TTACCTAAAA TAGAATCCGC AGAAATGCTG
AATGACGCGC GGGAAATGAT AAATCGTAAT AGATTGGATA ATGTGAATAT TATTGCGATT
ATTGAAACCG CGCGGGGGTT GCATAATGCA GAGGAGATTT GTGCGGCAGG GGTAGAAAGA
GTCGCATTTG GCTCGCTGGA TTTCTCGCTC GATATTCACT GCGATCAATC CCTGTATGCC
TTGCTGTATG CCAGAAGCCG TATTGTACTG GCTTCCAGAT TGGCCGACTT GCCCCCGCCA
ATAGATTGCG TCAACCCTGA CTTCACACAT CACGATCGCG TGTTAGCCGA TGCGTTACAT
GCACGTTCGC TCGGCTTCTC CGCCAAACTC TGCATTCATC CTTCACAGAT CGATGCTGTT
CAGCAGGCTT TCGCGACAGA TCGCAGTAAA CTAGATTGGG CAAAACAGGT GCTGAAAGCG
GCCGAACACA GCTACGCTTT CCAGATAAAC GGCGAGATGG TGGATTTACC CGTCATTGAG
CAGGCCAGAC AGCTATTGCG AGCGCAAAAT GTAGATGACT AA
 
Protein sequence
MKHAKTYLFV PGNAPHRFQH AVSCGADAVI FDLEDAVHPD EKNQARENII QWDKNDTPVS 
EINCKRYIRL NKFDSVAFRE DIEFLNKLNN KEKLRNNAKY RHKIVTWEIV LPKIESAEML
NDAREMINRN RLDNVNIIAI IETARGLHNA EEICAAGVER VAFGSLDFSL DIHCDQSLYA
LLYARSRIVL ASRLADLPPP IDCVNPDFTH HDRVLADALH ARSLGFSAKL CIHPSQIDAV
QQAFATDRSK LDWAKQVLKA AEHSYAFQIN GEMVDLPVIE QARQLLRAQN VDD