Gene PC1_3895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3895 
SymbolhslO 
ID8134882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4381164 
End bp4382033 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content53% 
IMG OID644867202 
ProductHsp33-like chaperonin 
Protein accessionYP_003019446 
Protein GI253690256 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCACG ACCAACTATA TCGTTATCTG TTTGAAAATT ATGCCGTTCG TGGCGAACTG 
GTAACCGTTA ACGAAACGTA TCAACGTATT TTGACCAACC ACGACTATCC GTCTGCGGTG
CAAACACTGC TGGGTGAAAT GCTGGTTGCC ACCAGCTTGT TGACGGCCAC GCTGAAATTC
AGCGGCGATA TTACCGTTCA GCTTCAGGGC GATGGCCCAC TGAAACTGGC GGTGATTAAC
GGCAATCATC AGCAGCAAAT GCGCGGCGTT GCCCGCCTAC AAGGGGATAT CGCGCCAGGG
AGTTCGCTGA AAGAGATGGT CGGCAATGGC TACCTGGTGA TTACCATTAC GCCGACGGAA
GGTGAGCGCT ATCAGGGCGT TGTCGGTTTA GAAGGTGAAA CCGTTGCTGA ATGTCTGGAA
AGCTATTTCC AGCAGTCCGA ACAGTTGCCG ACGCGGCTGT TTATCCGTAC CGGACAGCAC
GAAGGCAAGC AGGCGGCCGC TGGCATGCTG CTTCAGGTCT TGCCTGCACA GGATGCCGAT
CGTGATGATT TCGATCATCT GGCGCAGCTC ACCACAACGG TCAAAGGCGA AGAGCTGTTT
TCACTGCCTG CCACCGAAGT CCTGTACCGC CTTTACCATC AGGAAGAGGT CACGGTGTAC
GAACCGCAGG ATGTCGAATT CCGCTGCCAC TGCTCGCGCG ATCGTTGCGC CGATGCATTA
ATGACGCTGT CCGATCAGGA AGTGAATGAG ATGATCGAAC AAGATGGCGA AATCGATATG
CACTGTGATT ATTGCGGTAC GCACTACCTG TTTAATTCGC TGGACATCCG CGCCATACGG
CACGATTCAT CAGGAAATCT GTTGCATTAA
 
Protein sequence
MAHDQLYRYL FENYAVRGEL VTVNETYQRI LTNHDYPSAV QTLLGEMLVA TSLLTATLKF 
SGDITVQLQG DGPLKLAVIN GNHQQQMRGV ARLQGDIAPG SSLKEMVGNG YLVITITPTE
GERYQGVVGL EGETVAECLE SYFQQSEQLP TRLFIRTGQH EGKQAAAGML LQVLPAQDAD
RDDFDHLAQL TTTVKGEELF SLPATEVLYR LYHQEEVTVY EPQDVEFRCH CSRDRCADAL
MTLSDQEVNE MIEQDGEIDM HCDYCGTHYL FNSLDIRAIR HDSSGNLLH