| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3888 |
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| Symbol | |
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| ID | 8134875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4373081 |
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| End bp | 4373932 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644867195 |
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| Product | hypothetical protein |
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| Protein accession | YP_003019439 |
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| Protein GI | 253690249 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.498895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTATC ACATCTGGCG GGTTGGATTA GATATACAAA ACGGCTTCAT GCGCGCTCTG
GCGGTTCAGC GTCGCCGCGA TGGCTGGCAG CTTCGTCACT GGTGGCAATG TCCGCTACCA
GACGATACGT TGCGCACGGG TAGTCTACAC CATACTGAGG CGCTTTGTGA GGCCTTGCGC
ACATGGCGTC GTTTGCTGCC TGCACACATT TCGCTACGGG TAGGGTTTCC TGCTCAGTTG
ATTTTGCAGC AGCATCTACC GATGCCTGAC CGGCGTTTAC AGGAGCCAGG GCGTAGTCTC
TATATTGAAA CTATCGCGGC GCGTAAGCTG CCGGTTAGTA GCGAATCGCT GGCGATAGAC
TATCGGGAAG ACCCGCAGGA GCAGGGCTCG CTGCTGGTGA CGGCAGCACG CCGACAGGAA
ATCGATAACT GGCTGACATG CCTGAATAGC GCAGGGCTGC GTCCTGATGT CCTTGATGTC
TCAACGTGTG CGCTCCGAAT GATGGCGCAG CTGGCAGGGC TTGAATCTAA CCGTCTATTG
CTGCACCGCC TGTTGGATGC TTGGCTGTGG GTATCCCCGC TGAACCACGC TTTTCACTCG
GGGGTTATAC ACCTTGATGA GCTGAACAGT GAAGCCGATA TCTTATCGAT TGTGAGCACT
CGCTATCAGC ATGACATCGA CAATATCGCC TATTACTCTG GCATTTCGCC AGATTTACCC
CACCAGAAAG CCGACATATT ACAGCCGTGG TCGCCATTAA CGGTGTTTAG CCACCTGCAA
CCACCGCTGC CGCGTTTTCC CCCGGCTTTT GCGATTGCGG GTGGGTTGGC ATTGCGTCCT
GAGGATGACT GA
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| Protein sequence | MAYHIWRVGL DIQNGFMRAL AVQRRRDGWQ LRHWWQCPLP DDTLRTGSLH HTEALCEALR
TWRRLLPAHI SLRVGFPAQL ILQQHLPMPD RRLQEPGRSL YIETIAARKL PVSSESLAID
YREDPQEQGS LLVTAARRQE IDNWLTCLNS AGLRPDVLDV STCALRMMAQ LAGLESNRLL
LHRLLDAWLW VSPLNHAFHS GVIHLDELNS EADILSIVST RYQHDIDNIA YYSGISPDLP
HQKADILQPW SPLTVFSHLQ PPLPRFPPAF AIAGGLALRP EDD
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