| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3887 |
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| Symbol | |
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| ID | 8134874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4372510 |
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| End bp | 4373079 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867194 |
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| Product | Fimbrial assembly family protein |
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| Protein accession | YP_003019438 |
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| Protein GI | 253690248 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.412256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGCTGA TTAACCTTTT GCCTTGGCGC AAAACCCGGA TGCGCCAGCA GGCCCGTCGC
TGGCTGGGGC TGCTGTGGTT ACAGATAGGG ATAACGCTCT GCCTGCTCGT CGCGAGTTAC
CTACTTTGGC TGCATCGGCA ACAACAGGCG CAGGATGCAC TCAATACGGT GTTGGTCCAG
CAACAGCAAC TGACGGCGTT ATATCAACAA ACGCATCAGG CGCGAGAAAC GCTGCGCCGC
TATCTGGCCC AAGAACGGGC TCAGGCGGTT ATTCTGCAGG ACAATCATCG CAATCTCGGT
TTGCTAGAAC ATATTGCTGG CATCATGCCT GCGCGTCTGT GGTTGACGGA AATTGCCGAT
CGCGGATCGC ATCTGCTGCT GTCAGGTGTG AGTGAAAGCT ATCGCGATAT CATTACGCTA
CAGCACGCAT TATTGCGCCA TGCTTCCGTC GAACGCGTAC AGCTGCTACA TACGTCCCGA
GAGCGTGGGG TGAACACCGG GCTGCGCTTT TTCTTTCAGG CTAACTGGCG TGATGTGAGC
ACTTCCTCAC TAAGGGAAGG CCATGATTAA
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| Protein sequence | MLLINLLPWR KTRMRQQARR WLGLLWLQIG ITLCLLVASY LLWLHRQQQA QDALNTVLVQ
QQQLTALYQQ THQARETLRR YLAQERAQAV ILQDNHRNLG LLEHIAGIMP ARLWLTEIAD
RGSHLLLSGV SESYRDIITL QHALLRHASV ERVQLLHTSR ERGVNTGLRF FFQANWRDVS
TSSLREGHD
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