| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3881 |
|---|
| Symbol | |
|---|
| ID | 8134868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 4367008 |
|---|
| End bp | 4368024 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644867188 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003019432 |
|---|
| Protein GI | 253690242 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3266] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.234173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAGT TCAAGCCGGA AGATGAGCTG AAGCCTGATA CCAGTGACCG TCGACCTACT
CGTCAGCAAA AAAGCAGCAA CTTCGCGGTA CCTAAAATCG CGCTTTCCAG ACAGCACCTG
ATGATTGGTA TCGGGATTGT CGTGCTGGTG TTGCTGATCG TTGGTATCGG TTCTGCTTTG
CAGGCACCTT CTCAGCCACA AACGTCACAG ACGCAGAATC AAGCAAGCGG CGAGAGAAAT
ATTGATCTCT CTTCCTCGTC CTCTATGACG CAGAACGCAC AGCCTTCCTC ACAGGGTGAA
AGCCCTGCGG CAGTGTCCGG TGAGGCCAGT CATGGTCAAG CGTCAGGGCA GGCGTCTTCT
CAGATGCCGA CGTCGCCTCA GACATTGAGT GCTCCGCCGA TTTCCGGTAC GCCGACGGAT
GCGCAGGTTC AGCAGCCAGT AGCAGGCCAG CAGCGTATTG AGCTGCCGGG CAATATCACC
GATGCGCTGT CGCAACAGCA AGGGCGCGTG AGCGAATTCT CTCAGGGTGC GACAGGAAAC
TCGACGCTGC CGACGGCGCC TGCGACAGTC GCGCCGACGG GGAAAACGCC AGCGGCCTCA
TCCGCTAAAA ATACGCACAA TACGGCGCCT GCGCACGTGA ATAACACCAA GCCTGCTGTG
AACAGCGCAC CAAAAGCGCC AGTAGCCAGC AAGCCTGCGG CTAACGCCAA AGCGGCACCG
GCGGCAGCCG GGCAAAATGT CTCCGTACAG AATGCGCCTG CTAGCCACTT TACTTTGCAA
CTGAGCAGCG CTTCACGTGC GGACACGCTG AAAGCCTACG CGAAACAGAA CAATCTCACC
CATTCGTGGG TGTACGAAAC GAAACGAGAC GGAAAATCCT GGTATGTGTT AGTGACCGGA
GTCTATGCTT CTTCTGCGGA AGCGAAACAG GCGATTGCCG CGTTGCCCGC AGAAGTTCAA
GCGAAAAAAC CATGGGTTAA GCCGATCCGC CAGGTGAAGC AGGACTTGAA TAAGTAA
|
|---|
| Protein sequence | MDEFKPEDEL KPDTSDRRPT RQQKSSNFAV PKIALSRQHL MIGIGIVVLV LLIVGIGSAL
QAPSQPQTSQ TQNQASGERN IDLSSSSSMT QNAQPSSQGE SPAAVSGEAS HGQASGQASS
QMPTSPQTLS APPISGTPTD AQVQQPVAGQ QRIELPGNIT DALSQQQGRV SEFSQGATGN
STLPTAPATV APTGKTPAAS SAKNTHNTAP AHVNNTKPAV NSAPKAPVAS KPAANAKAAP
AAAGQNVSVQ NAPASHFTLQ LSSASRADTL KAYAKQNNLT HSWVYETKRD GKSWYVLVTG
VYASSAEAKQ AIAALPAEVQ AKKPWVKPIR QVKQDLNK
|
|---|
| |