Gene PC1_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3754 
Symbol 
ID8134737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4241127 
End bp4242176 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content54% 
IMG OID644867057 
Productribosome-associated GTPase 
Protein accessionYP_003019305 
Protein GI253690115 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAAAA AGAAACTGTC GAAAGGTCAG CAGCGTCGGG TTAGCGCAAA CCACCAGCGC 
CGCCTGAAAA AAACGGAAAG CAAAGTCGAA TGGGAAGATA GCCAACTGGG CGACGCACAG 
GAAGGCATTA TCATCAGCCG ATTCGGTATG CACGCCGATG TGGAAGCCAC CGATGGCGTG 
GTGCACCGCT GCAACATTCG TCGGACCCTT TCATCGCTGG TTACTGGCGA TCGCGTCGTC 
TGGCGCCCAG GCCATGAATC GCTCGCCGGC ATCAGCGGGA TCGTGGAGGC CGTTCACCCC 
CGTCATTCCG TCCTGACGCG TCCTGACTAT TACGATGGTA TTAAACCGAT CGCTGCGAAT 
ATCGATCAGA TCGTGATCGT TTCCGCGATC TTGCCTGAAC TGTCGCTGAA CATTATCGAT 
CGCTATCTGG TCGCTTGCGA AACGCTGGAG ATCGAACCGC TGATCGTGCT GAACAAAATC 
GATCTGCTGG ATGACGAATC CCGCCAGTTT GTTGATAAAT TGATGGATAT CTACCGTGCG 
CTCAATTATC GCGTGCTGAT GGTGTCTAGC CATACTCAAC AGGGTATCCC TGAACTGGAA 
CAGGCGCTCA CCGACCGTAT CAGTATTTTC GCTGGACAAT CAGGCGTCGG GAAATCCAGC 
CTGCTTAACG CGCTGCTCGC ACTGGATGAA GAACGCATTC TGGTCAATGA GGTTTCCGAT 
AACTCAGGAT TGGGGCAGCA CACGACCACC GCTTCCCGGC TTTACCACTT CCCGCACGGC 
GGCGACGTCA TCGATTCTCC GGGCGTGCGT GAATTTGGCC TGTGGCATCT GGAACCCGAA 
CAGGTGACGC GTGGTTTCAT CGAGCTACGC CAATATATCG GCTCGTGTAA GTTCCGCGAC 
TGTAAACATG AAAACGATCC GGGTTGCGCC ATTAACGCCG CACTTGATCG CGGAGAGATT 
GCCGTAGAGC GCTATGATAA CTATCACCGG ATTCTGGAAA GCATGGCGCA AGTAAAAACG 
CGTAAAGGCT TTTCGGATAC AGATAACTGA
 
Protein sequence
MSKKKLSKGQ QRRVSANHQR RLKKTESKVE WEDSQLGDAQ EGIIISRFGM HADVEATDGV 
VHRCNIRRTL SSLVTGDRVV WRPGHESLAG ISGIVEAVHP RHSVLTRPDY YDGIKPIAAN 
IDQIVIVSAI LPELSLNIID RYLVACETLE IEPLIVLNKI DLLDDESRQF VDKLMDIYRA 
LNYRVLMVSS HTQQGIPELE QALTDRISIF AGQSGVGKSS LLNALLALDE ERILVNEVSD 
NSGLGQHTTT ASRLYHFPHG GDVIDSPGVR EFGLWHLEPE QVTRGFIELR QYIGSCKFRD 
CKHENDPGCA INAALDRGEI AVERYDNYHR ILESMAQVKT RKGFSDTDN