| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3745 |
|---|
| Symbol | |
|---|
| ID | 8134726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 4230777 |
|---|
| End bp | 4231943 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644867046 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003019296 |
|---|
| Protein GI | 253690106 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2807] Cyanate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTAC ATTCCCGTGA AACCAATTTC ACGACACTGA ATATGATTAT CGCCGCCTCG
CTTGTGGGGT TGGTAACAGG ATACACCCTG CCGTTGATCA GCCTGAAACT GGCGGAGCAT
GGGCACAGCA CGGCAACGCT CGGTGTTCTG GCAGCCCTTC CGGCGGCCGG GATGATGCTC
TCTTCTTTCG TTACGCCGTG GCTCAGCCGC CACCTGCAAG CCAGCTATCT GCTCTCCGGC
AGCCTGATTA TTCTGGCGGC ATCAACGATT GCCTCATTCC TGCTGTCACA CCCTGTTTCC
CTCATTTTAC CCCGCCTGCT AACCGGGCTT GCTTCGGGGA TTCTGGTGGT ACTGGGAGAA
ACCTGGGTCA CCAGTCGGGC TTCAGACAAA CACAAAGCGA CGCTAACGGG GCTGTATGCC
GCCGTTTTCA CAGGGTGTCA GTTGATAGGA CCGCTGCTTA TCGCCGCTGG CGAGCACATG
CAAACCTATG CTCTGTGGCT GATTTGTGGC ATCTCCGCCG CCTGTGCGTT CATGCTGAGG
AACTGCGCCA CGATGGTGCG GGCAGATGAA TCATCCTCGG CATCTTATCG GGACTTGATC
CCTTTTCTTC CGGCCATCGC CTCTGGTGTG CTCTGCTTTT CCTTCTTCGA TGCCAGCATC
CTTTCACTCT TTCCGCTTTA TGGCATGGAA CAGGGCTTAG ATGAAAAATC CGCGATCTTA
TTGGTTACGC TCATCTTTCT GGGCGACGCC GTATTTCAGA CGCCGATTGG CTGGCTGGCA
GACAAATGTG GCATCATCAG AACCCACATC GGCTGCGGCA TCCTTTTCTG TGTGATGCTG
GTATTGATCA CCTTCTCGTT TTCCTCCCCT ACACTTCTGG TTCCCGTCTG TATCACACTG
GGTGCCGCCG CAGGCGGGCT TTACACGCTG TCTCTGGTTC GCGCGGGTCA GCGGTTTGCT
GGTCAGCGAC TGATCGTGAT GAATTCCCTT CTGGGGCTGG TATGGTCTGC GGGCAGTATC
AGCGGGCCAC TGTTCTCCGG TGCCGCCATT ACGTTCTATG GCTACGACGG TCTGATCGCC
ATCTTGCTGT TAACTGGCGT GCTGTTTGTC GGCATACAGG GCGTATTAAA AAAAGCACGC
GTCTCGCGTT CGCTGGGGGA AGAGTAA
|
|---|
| Protein sequence | MTVHSRETNF TTLNMIIAAS LVGLVTGYTL PLISLKLAEH GHSTATLGVL AALPAAGMML
SSFVTPWLSR HLQASYLLSG SLIILAASTI ASFLLSHPVS LILPRLLTGL ASGILVVLGE
TWVTSRASDK HKATLTGLYA AVFTGCQLIG PLLIAAGEHM QTYALWLICG ISAACAFMLR
NCATMVRADE SSSASYRDLI PFLPAIASGV LCFSFFDASI LSLFPLYGME QGLDEKSAIL
LVTLIFLGDA VFQTPIGWLA DKCGIIRTHI GCGILFCVML VLITFSFSSP TLLVPVCITL
GAAAGGLYTL SLVRAGQRFA GQRLIVMNSL LGLVWSAGSI SGPLFSGAAI TFYGYDGLIA
ILLLTGVLFV GIQGVLKKAR VSRSLGEE
|
|---|
| |