| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3733 |
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| Symbol | |
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| ID | 8134713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4215274 |
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| End bp | 4216740 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867033 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003019284 |
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| Protein GI | 253690094 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAT CTATCTTGTG TTTACTGATT TTGTTTTCTG TTCATGAAGG GTATGCGGAA
ACAGCGTTGA ATCCTTCTCA GGCGACGCGG CAGGGTCAGG CGACAGTCAG TACATCGTTA
AATGCACAAA CGATCGATCT CACGCTGAGC GATGCCATTT ATCTTGGGTT ACGCGACAAT
CGCGCGATCC GTAGCGCCTA TCTGGATCGT ATTGCACAGA AATTTGATCT TCGGGTGGCG
GAGGATCGTT TTACCCCCAA ACTGTCGCTG ACGGGCAGCT ACCTTTCCAA CCGTAACCAA
AGCGATCGTT ACCGGCAGGG GAATCTGACG CCGACGTCAA CCCTGCTCAC GCCGTATGGT
ACTCGTTTCA GTCTCGGCTG GACCTACCGC CACACGCAGG CTGATAACGC CGGGTTGTCG
CGTAACGATG GTGCCAACAT TACTGTGATC CAACCTTTGC TTCGCGGTGC AGGTAAAGAT
GTTACGACTG CGCCGGTTCA CATTGCACGG CTGACTGAAC AGTTAAATCG TCTGGCGCTG
AAATCTACGG TTTCACAGAC GATTACGCAG ATTATCACCG CTTATCGGGA ACTGTTGCGC
TCACAGGAGC AATTGCAAAT CGCTCGTGAT GCGCTGGCGC GTGCGCGCCA GTTGGTTGAG
GTCAACCGTG CAATGATTGC CGCCGGACGC ATGGCCGAAT TTGAAATTGT GCAAACCGAA
GCTGAAGTGG CTACACAGGA ACTGGCGCAT GAAGAAGCCA GAAACCAGCT GGATACTGCT
CGCCTTGCGC TGCTGCAACT TCTGGCGTTG GATTTAAATA CGTTGATTGT GGCAACGGAC
GCCATGCAGG CACAGCGCGT TGAGGTGAAT GCTGCGCAGG CGCTGAAGCA GGCCGAAGCC
TCTCGGCCCG CTTATCTGGC ACAGATCATT GCTAACGAGC AGGCGGCGCT CGGTCTGGCG
GTTGCACGTA ACGATCGCCT GTGGGATGTC TCGTTGGTAG GGGGGGCGAG TCAGGTACGC
GACCGTGCGG CACAGAGCAG CACCTCACGT ACCTGGGAGA ATTATGTTGG CGTTCAGGTG
GAGATTCCTA TTGGCGATCT GAGTACCCGT CAGGCGGAGG TTCAGGCGCG AGTGAATGTG
CGCAATCAGC ACATCCAACT GGATGAAGTC AGGCAGCAGC TTGAACGCGA TGTCACCAAT
GCGGTACGTG ATATCGGTAC GCGCTGGCGG CAGTTTGAGA TTTCCCAACG TGCGCGGGAT
TTGTCGCGCC GCAAGCTGGA AATTGAGCGG GAAAAGCTCA CCGTTGGGCG TTCCAGTAAC
TTTCAGGTGT TGAGCTTTGA GAACGATTTA CGCAACGCTG AAAATGCCCG CCTCAATGCG
CTTATCAGCT ACCTTAATGC GCAGGCTGAA CTGGATGAGA CGCTGGGCAC CACATTACAA
AGCTGGGATA TCGCACTCAA TGATTAG
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| Protein sequence | MRKSILCLLI LFSVHEGYAE TALNPSQATR QGQATVSTSL NAQTIDLTLS DAIYLGLRDN
RAIRSAYLDR IAQKFDLRVA EDRFTPKLSL TGSYLSNRNQ SDRYRQGNLT PTSTLLTPYG
TRFSLGWTYR HTQADNAGLS RNDGANITVI QPLLRGAGKD VTTAPVHIAR LTEQLNRLAL
KSTVSQTITQ IITAYRELLR SQEQLQIARD ALARARQLVE VNRAMIAAGR MAEFEIVQTE
AEVATQELAH EEARNQLDTA RLALLQLLAL DLNTLIVATD AMQAQRVEVN AAQALKQAEA
SRPAYLAQII ANEQAALGLA VARNDRLWDV SLVGGASQVR DRAAQSSTSR TWENYVGVQV
EIPIGDLSTR QAEVQARVNV RNQHIQLDEV RQQLERDVTN AVRDIGTRWR QFEISQRARD
LSRRKLEIER EKLTVGRSSN FQVLSFENDL RNAENARLNA LISYLNAQAE LDETLGTTLQ
SWDIALND
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