Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3709 |
Symbol | |
ID | 8134689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4188072 |
End bp | 4188770 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644867009 |
Product | Deoxyribonuclease I |
Protein accession | YP_003019260 |
Protein GI | 253690070 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000796266 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTACGCA AAATTCTCGC TATCTCCGCC GTTAGCGCGG GTCTGTTTTC GGCTGCCGCG TTAGGTCAGA ACATCAATAA TTTTTCGCAG GCAAAAGCCG CCGCTGTCGA CATTAACCGG GATGCGCCGG GTTCGTTCTA CTGCGGCTGC AAGATTACGT GGCAGGGCAA GAAAGGCACG CCCGATCTTG AATCTTGCGG CTATCAGGTC AGAAAAAATG AACAGCGTGC CAGCCGTATC GAGTGGGAGC ATGTTGTGCC CGCCTGGCAG TTCGGCCATC AGCGCCAGTG TTGGCAGGAT GGCGGCAGAA AGAACTGTAG CAGCGACCCC GTCTACCGTG AGATGGAAAC CGACTTACAT AACCTGCAAC CCGCTATCGG CGAGGTCAAC GGCGATCGCG GTAATGCCAT GTATGGACAG TGGAACGGTG GCACATCCCA ATACGGGCAA TGCGAGATGA AGGTCGATTT CAAAAATAAT CTGGCAGAAC CGCCTGCTCG CGCCCGTGGC CAGATCGCTC GTACCTATTT CTACATGCGT GACCGCTATC AGTTACGCCT GTCCAATCAA CAAACCCAGT TGTTCGAAGC CTGGGATAAG CTGTATCCGG TCACCCAGTG GGAATGTACC CGCAATCAAC GCATCGCTGC AAAACAGGGA AACCCGAATC CCTACGTTCA ACAAGCTTGC CAGCGCTAG
|
Protein sequence | MLRKILAISA VSAGLFSAAA LGQNINNFSQ AKAAAVDINR DAPGSFYCGC KITWQGKKGT PDLESCGYQV RKNEQRASRI EWEHVVPAWQ FGHQRQCWQD GGRKNCSSDP VYREMETDLH NLQPAIGEVN GDRGNAMYGQ WNGGTSQYGQ CEMKVDFKNN LAEPPARARG QIARTYFYMR DRYQLRLSNQ QTQLFEAWDK LYPVTQWECT RNQRIAAKQG NPNPYVQQAC QR
|
| |