Gene PC1_3709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3709 
Symbol 
ID8134689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4188072 
End bp4188770 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content55% 
IMG OID644867009 
ProductDeoxyribonuclease I 
Protein accessionYP_003019260 
Protein GI253690070 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000796266 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACGCA AAATTCTCGC TATCTCCGCC GTTAGCGCGG GTCTGTTTTC GGCTGCCGCG 
TTAGGTCAGA ACATCAATAA TTTTTCGCAG GCAAAAGCCG CCGCTGTCGA CATTAACCGG
GATGCGCCGG GTTCGTTCTA CTGCGGCTGC AAGATTACGT GGCAGGGCAA GAAAGGCACG
CCCGATCTTG AATCTTGCGG CTATCAGGTC AGAAAAAATG AACAGCGTGC CAGCCGTATC
GAGTGGGAGC ATGTTGTGCC CGCCTGGCAG TTCGGCCATC AGCGCCAGTG TTGGCAGGAT
GGCGGCAGAA AGAACTGTAG CAGCGACCCC GTCTACCGTG AGATGGAAAC CGACTTACAT
AACCTGCAAC CCGCTATCGG CGAGGTCAAC GGCGATCGCG GTAATGCCAT GTATGGACAG
TGGAACGGTG GCACATCCCA ATACGGGCAA TGCGAGATGA AGGTCGATTT CAAAAATAAT
CTGGCAGAAC CGCCTGCTCG CGCCCGTGGC CAGATCGCTC GTACCTATTT CTACATGCGT
GACCGCTATC AGTTACGCCT GTCCAATCAA CAAACCCAGT TGTTCGAAGC CTGGGATAAG
CTGTATCCGG TCACCCAGTG GGAATGTACC CGCAATCAAC GCATCGCTGC AAAACAGGGA
AACCCGAATC CCTACGTTCA ACAAGCTTGC CAGCGCTAG
 
Protein sequence
MLRKILAISA VSAGLFSAAA LGQNINNFSQ AKAAAVDINR DAPGSFYCGC KITWQGKKGT 
PDLESCGYQV RKNEQRASRI EWEHVVPAWQ FGHQRQCWQD GGRKNCSSDP VYREMETDLH
NLQPAIGEVN GDRGNAMYGQ WNGGTSQYGQ CEMKVDFKNN LAEPPARARG QIARTYFYMR
DRYQLRLSNQ QTQLFEAWDK LYPVTQWECT RNQRIAAKQG NPNPYVQQAC QR