| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3644 |
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| Symbol | |
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| ID | 8134624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4110530 |
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| End bp | 4111144 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866944 |
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| Product | Lysine exporter protein (LYSE/YGGA) |
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| Protein accession | YP_003019195 |
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| Protein GI | 253690005 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGAAA CATCGCTGTT TGTCGCGACC ATCGCCACGC TGGGCATGAT ATCTCCCGGC
CCCGACTTTT TCCTCGTCAT CAGGAATGCC GCGCGTTACC CGCGCGTCGC CGCGCTGATG
ACCGCGTTTG GCGTAGTCTG CGGTGTGGCA ACCCATATGG CGTATTGCGT CGCCGGGCTC
GCCGTCGTCA TCACCACTAC ACCGTGGCTG TTTAATGTAC TGAAATATGC AGGCGCCGCC
TATCTGATCT GGATCGGTAT TCAAGCGTTA TTCGCACGCG GTGGCAGCAA GATGGACGTA
TCAAATCTGG CACAACAAAG CGTCAGCCTA AAAAAAGCGT TCCTGCAAGG TTACCTCTGC
AACCTGCTTA ATCCAAAGGC CACACTGTTC TTTCTGGCGA TGTTCACGCA GGTTTTGAAT
ATTCACTCCG GCATCGGTGA AAAGCTGTGG TACGCCATGA TTATCTTGCT GCTATCTGCC
GTCTGGTGGC CGCTGTTGGT GGTACTTTTC CAAAGCGAAC CCGTGCGGCG TGGGTTGGCT
AAAGTGCAAA AACTGGTGGA TAAGCTGCTA GGAACGGTAT TGATCGCATT GGGCATCAAG
GTGGCACTGG GGTGA
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| Protein sequence | MLETSLFVAT IATLGMISPG PDFFLVIRNA ARYPRVAALM TAFGVVCGVA THMAYCVAGL
AVVITTTPWL FNVLKYAGAA YLIWIGIQAL FARGGSKMDV SNLAQQSVSL KKAFLQGYLC
NLLNPKATLF FLAMFTQVLN IHSGIGEKLW YAMIILLLSA VWWPLLVVLF QSEPVRRGLA
KVQKLVDKLL GTVLIALGIK VALG
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