| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3627 |
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| Symbol | |
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| ID | 8134607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4090583 |
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| End bp | 4092163 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866927 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003019178 |
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| Protein GI | 253689988 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTTA AACTCCTCAA CCATTTCGGA TTACGACGTC TTATCCTACT CTTGGCAGTG
GCGAGCGCTG TGGTAACACT GGCAAACAGT TTTTATGCCA GTTATCGCGT CCAACGAGAG
CTGTTGATTG ATAACACGCT GGAAGCCAAC CGTGTTTACG CCACCAAACT CGCGGCCATG
ACCCATTCCT TCTTTAAGGA ATCTCAACAG CAGTTAGCCT ACAGCGCCAA CATCGTCGCC
ACTCAGATGG ATGATAAGGT CAGCCTGCTT AAAGAAGCAG ACCGCCTGCG GCTACAGACC
AGCAATTTCA ACTCTGTCGT TATCGCAGAT GAAAAAGGCA TCGTCAGAGC CACATCACCC
GATACGTTCC AGTTAATCGG AAGAAGCCTG ACCACAGACG GCGCACTTGA AGCCTTGAGA
GAAAAACAGC CTCTTATCAG CCAGCCCTAT GTATCTGCCG CCAACAATCT AATCGTGTTG
ATATCGTCGC CGATCTTCAC CCGAGATGGG CGCTACAAAG GGTTTATTGG TGGATCGATC
TATCTTAAAC AACCCAGCGT TCTCAATGCG CTATTAGACA AACACTACTA CCGCGACGGT
TCTTATATTT ATGTCACCGA TAAGAACAAA AGAATGCTGT ACCACCGCGA TATGGAACGG
ATTGGTAAAA CAGAGACCAA CAATCTACAG ATCGACGCAC AACATGAGCA TAACGGTAGC
CAGCACATGC TGAACTATCT GGGTGAGAAG ATGTTAGCGG GCTATGCCGT TGAGTCTACC
TCACAGTGGC AGATCGTGGC GCTCCGTCCA ACCGACATTA CGCTGAAACC GTTAGATGGC
CTGATGCTGA ACGTGCTGCG CCACACGCTT CCACTCGCGC TGTTAACCAT ATTCTGCGTC
TGGCTGCTTG CCCGTCTCAT CGCCCAGCCG CTGTGGCTGC TGGCACGCAG CGCTAACAAG
ATGGATGCGA CGGATGTCTC CGACGACATC AGAAATATCC ACTCCTGGTA TTTCGAGGCT
TCACAGCTCA AGCAGGCCAT GCTGCTGGGT ATCGATCTAC TCCAACGCAA AATCGGTAAG
TTACGTTCTG AGGCGCACTC AGATCCCATG ACCGATCTGC TCAACCGCCG TGGGTTGGAC
AGCGTCCTCC GCTACTGGCA AATGGGGCAG AAAAGCTTTG CCGTCATCGC TCTGGATATC
GATCGCTTCA AACGCATCAA TGACACCTAC GGTCATGATA TCGGCGACAA CGTCATTCGC
TATCTTTCAC AGCTTATTCG CACCAGCTCA CGCGATTCCG ACATTCTGTG CCGCAGCGGC
GGTGAAGAAT TTTTAATCCT GCTGCCGGAA ACCAGCCTCG ATGTCGCACT CAGCATTGCT
GAACGGCTAC GGCTGCGCAT GGAGGAATCA ACCATTCCTG TCGTGGGCAA TATCACCATC
TCATTAGGCG TTGCTCTGTG GGAACCGGGA GCCAACGATA CGTCGATCGA GCGTACCTTC
AAGCTGGCGG ATGAAGCTCT GTATCAAGCC AAGCAGGAAG GCCGCAACCG CGTGGTGTCT
GCCTCCGGCA ACGAGCAGTA A
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| Protein sequence | MFFKLLNHFG LRRLILLLAV ASAVVTLANS FYASYRVQRE LLIDNTLEAN RVYATKLAAM
THSFFKESQQ QLAYSANIVA TQMDDKVSLL KEADRLRLQT SNFNSVVIAD EKGIVRATSP
DTFQLIGRSL TTDGALEALR EKQPLISQPY VSAANNLIVL ISSPIFTRDG RYKGFIGGSI
YLKQPSVLNA LLDKHYYRDG SYIYVTDKNK RMLYHRDMER IGKTETNNLQ IDAQHEHNGS
QHMLNYLGEK MLAGYAVEST SQWQIVALRP TDITLKPLDG LMLNVLRHTL PLALLTIFCV
WLLARLIAQP LWLLARSANK MDATDVSDDI RNIHSWYFEA SQLKQAMLLG IDLLQRKIGK
LRSEAHSDPM TDLLNRRGLD SVLRYWQMGQ KSFAVIALDI DRFKRINDTY GHDIGDNVIR
YLSQLIRTSS RDSDILCRSG GEEFLILLPE TSLDVALSIA ERLRLRMEES TIPVVGNITI
SLGVALWEPG ANDTSIERTF KLADEALYQA KQEGRNRVVS ASGNEQ
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