| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3571 |
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| Symbol | |
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| ID | 8134551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4028091 |
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| End bp | 4028945 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866871 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_003019122 |
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| Protein GI | 253689932 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTGT TTACACTGTT GTTTACGCTG GCCTGGGAGC GCTTGTTCAA ACAGGGAGAG
CACTGGCAGA TCGATCATCG ACTTGAGGTG GTGTTCCGGC ACGTTCCATC TCCGTCTTTA
TTTCAAACGT TGTTCCTGAC GCTATGCAGC ATGGGCATCG TGGCTGGCCT GCTGTGGCTC
ACAAGCGGCA TTCTGTTCGG TCTGATTTCT CTTCTGCTAT GGATTGTTAT CAGCCTGATG
TGCATTGGCG CGGGTGAAAT TCGTCAGCAC TATCGGCGCT ATTTGCAGGC GGCGCAGCGC
GGCGAGGCAG ATGCCCGCCG GGAAATGGCG ACGGAGCTGG CGTTGATTCA CGGGCTGCCC
GTCGGCACGG GCGAAAGCGA GCAGTTGAAA GAACTGCAAA ACGCGTTGCT GTGGATAAAT
TTCCGGTTTT ATTTAGCGCC GCTGTTCTGG TTCATCGCAG CCGGGCCATA TGGGCCGATT
GCGCTGATGG GATACGCATT TCTACGTGCC AGACAGACCT GGCTGGCGCG GCACAACACG
CCGCTGGAGC GTGCGCAGTC CGGCGTTGAT AGCTTGCTGC ATTGGCTTGA CTGGATTCCC
GCGCGTTTGG CCGGTGCGGC TTACGCACTA TTAGGCCATG GTGAAAAAGC GCTGCCAGCC
TGGTTCGCGT CGCTAGGGGA TTTCCGCAGT TCGCAATATT GGGTGTTAAC GCAGTTGGCT
CAATTTTCTC TGGCGCGTGA ACCCCACATT GAGCCCGTAG AGACGCCCAA AGCTGCTGTG
ACGTTAGCGA AAAAGGTGAC ATTGGTGCTG GTAGTGGTGG TCGCACTTCT GACGATATAC
GGTGCGCTGG TCTGA
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| Protein sequence | MTLFTLLFTL AWERLFKQGE HWQIDHRLEV VFRHVPSPSL FQTLFLTLCS MGIVAGLLWL
TSGILFGLIS LLLWIVISLM CIGAGEIRQH YRRYLQAAQR GEADARREMA TELALIHGLP
VGTGESEQLK ELQNALLWIN FRFYLAPLFW FIAAGPYGPI ALMGYAFLRA RQTWLARHNT
PLERAQSGVD SLLHWLDWIP ARLAGAAYAL LGHGEKALPA WFASLGDFRS SQYWVLTQLA
QFSLAREPHI EPVETPKAAV TLAKKVTLVL VVVVALLTIY GALV
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