Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3566 |
Symbol | |
ID | 8134546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4018847 |
End bp | 4020271 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644866866 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_003019117 |
Protein GI | 253689927 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACTG AAATTAAAGC TCAGGTAGTG GTACTTGGTG CCGGCCCCGC GGGTTACTCT GCTGCATTCC GCGCGGCGGA TTTGGGTCTG GAAACCGTAC TGGTAGAGCG CTACTCCACG CTGGGTGGGG TGTGTCTGAA TGTTGGCTGT ATTCCTTCCA AAGCCCTGCT GCACGTTGCT AAAGTCATTG AAGAAGCTAA AGCGCTGGCG GAACACGGTA TCGTGTTCGG TGAACCTAAA ACCGACATTG ATAAAATCCG TCTGTGGAAA GAAAAAGTCA TCACCCAACT GACCGGTGGT CTGGCTGGTA TGGCGAAAGG CCGTAAAGTT AAAGTCGTTA ACGGTCTGGG CAAATTTACC GGTGCTAACA CGCTGGAAGT TGACGGTGAA AACGGCAAAA CGACGATCAA CTTCGATAAC GCCATTATCG CTGCGGGTTC ACGTCCGATC CAACTGCCTT TCATTCCTCA TGATGACCCA CGCGTATGGG ATTCTACCGA TGCGCTGGAG CTGAAAAATG TCCCAGGACG TCTTCTGGTT ATGGGCGGCG GTATCATCGG TCTGGAAATG GGTACCGTTT ACCACGCTCT GGGTTCACAG ATTGACGTTG TTGAAATGTT CGATCAGGTG ATTCCGGCAG CTGACAAAGA CATCATCAAA GTCTTCACCA AACGTATCAG CAAGCAGTTC AATCTGATGC TGGAAACCAA AGTGACGGCG GTAGAAGCCA AAGAAGACGG CATCTATGTG ACGATGGAAG GTAAAAAAGC GCCAGCCGAA CCACAGCGTT ACGACGCGGT TCTGGTCGCT ATCGGCCGTG TGCCGAACGG CAAAAACCTG GATGCTGGCA AAGCAGGCGT GGAAGTTGAC GATCGCGGCT TCATCCATGT TGATAAGCAA ATGCGCACCA ACGTGCCGCA CATCTACGCT ATCGGCGACA TCGTCGGTCA GCCGATGCTG GCGCACAAAG GCGTGCATGA AGGCCACGTT GCTGCTGAAG TCATCTCCGG TAAGAAACAC TACTTCGATC CGAAAGTAAT TCCTTCTATT GCCTATACCG AACCGGAAGT GGCATGGGTG GGTCTGACTG AGAAAGAAGC GAAAGAGAAA GGCATCAGCT ACGAAACCGC GACCTTCCCA TGGGCGGCGT CTGGCCGTGC GATCGCGTCT GACTGCGCTG ACGGTATGAC CAAACTGATT TTCGACAAAG AAACTCACCG TGTTATTGGT GGTGCGATTG TCGGTACTAA CGGTGGTGAA CTGTTAGGTG AAATCGGTCT GGCGATCGAA ATGGGCTGTG ATGCGGAAGA TATCGCGTTG ACCATCCATG CGCACCCAAC GCTGCATGAG TCTGTTGGTC TGGCTGCTGA AATTTTTGAA GGTAGCATCA CCGACCTGCC GAACCCGAAA GCGAAGAAGA AGTAA
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Protein sequence | MSTEIKAQVV VLGAGPAGYS AAFRAADLGL ETVLVERYST LGGVCLNVGC IPSKALLHVA KVIEEAKALA EHGIVFGEPK TDIDKIRLWK EKVITQLTGG LAGMAKGRKV KVVNGLGKFT GANTLEVDGE NGKTTINFDN AIIAAGSRPI QLPFIPHDDP RVWDSTDALE LKNVPGRLLV MGGGIIGLEM GTVYHALGSQ IDVVEMFDQV IPAADKDIIK VFTKRISKQF NLMLETKVTA VEAKEDGIYV TMEGKKAPAE PQRYDAVLVA IGRVPNGKNL DAGKAGVEVD DRGFIHVDKQ MRTNVPHIYA IGDIVGQPML AHKGVHEGHV AAEVISGKKH YFDPKVIPSI AYTEPEVAWV GLTEKEAKEK GISYETATFP WAASGRAIAS DCADGMTKLI FDKETHRVIG GAIVGTNGGE LLGEIGLAIE MGCDAEDIAL TIHAHPTLHE SVGLAAEIFE GSITDLPNPK AKKK
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