| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3559 |
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| Symbol | |
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| ID | 8134539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4010225 |
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| End bp | 4011553 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644866859 |
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| Product | MmgE/PrpD family protein |
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| Protein accession | YP_003019110 |
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| Protein GI | 253689920 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.595946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAATC AGACTGATAT CACCGCAGCG CTTGCCCACC ACATCATCCA TAGCGAACCC
AATCGGGAAG CGATTGATGC CGCCCGTGAC GGAGTCACTG ACTTCATCTC TACCGCACTC
CCGATCGCAC AGGGAGCGAT TGCCGATAGC GGGCTCGCGC CATTAAAGCA AGTGTTCAGC
GGCACGGACA GCCTGACGCG TAGTCTGATT CTGGGCTATT CCGGCCACGT ACTGGACTTT
GACGATTACC ATCCGGCGTT TCGTGGACAC CCCAGCACCG TCATTCTGCC AGCGCTGTTT
GCCCTTGCCG CTGAGGCGTC ATCCGTAACG GAAGAGGCGT TTTTGACGGC GTATGTGATC
GGCGTGGAAG CGGCGGGCAG AATCGGGCTG GCATGCGGCC CACGTCATTA CAGCCTCGGC
TACCATAACA CCGCCACGCT CGGCGCTATC GCCGCCGCTG CCGCCGCGGC ACGTCTGGCT
GGCGCATCGG TGGAACAGAC GCAGACCATT CTTGGTCTGG CTGCCACGCA GGCCGCAGGG
CTACGGGCGC AGTTTGGTTC AGCGGTCAAA CCGCTACATG CCGGGCTTTC AGCCAGAGCG
GGGCTAACCG CCGTCAAGCT AGGCTTGGCG GGTTTCGAGG GCAACACACA GCAGGTGATT
GACGCCTTTC TTGCCGCGCA CGGCGATCAA AAACAGCAGC CGGAGCTGCT GGTTGAAAAC
TGGGGTGCGC CGTGGCGCAT GCTTTCTCCC GGCCTGGAGT TCAAGCGCTA TCCAACCTGT
GGCGGCACCC ACAGCGCTGC CGAGGCGGCT TTTGCCCTGC GGGAACAATG GCATAAGCAG
AATGGTGCGA ATGCCGATAT GGCTGATGCC ATCGAACAGA TCACGGTGAC GTTCCCGCCG
GGTGGCGATG TTGCACCGTT TATCCGTAAC GCGACAAACG GCGTAGAGGC GCGGTTCAGT
CTGGAATATG TGATTGCGGC GGCATTGATT GAAGGGGAGC TGAAGCTGGC ACATTTCTCG
GAAGCACCGG TTGAAACCAC GATCTCAGCG CTGGCAAATC GCGTCATACG CCGCGCCGAT
GAAACCGCCC CACCCGATGA GCTTGACCCG GAAGCACGTT TTCATGAAGT TACGCTGCAC
TTGCGTAACG GCAACACGTT AGTACAGCGC ACGACTCGTC AGGAAACCTC GGCACGCCCC
ACCGATCTCC GTGCCAAGCT GCGGCAAACC CTCGGCTCGC TGACGCATCT CGACAGCGAC
CAGATCGCCG ACCGCTGCGC ATTACGGCAT GACGGCGATT TACGCTATTT GCTCGGGCTA
TTGTTTTAA
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| Protein sequence | MTNQTDITAA LAHHIIHSEP NREAIDAARD GVTDFISTAL PIAQGAIADS GLAPLKQVFS
GTDSLTRSLI LGYSGHVLDF DDYHPAFRGH PSTVILPALF ALAAEASSVT EEAFLTAYVI
GVEAAGRIGL ACGPRHYSLG YHNTATLGAI AAAAAAARLA GASVEQTQTI LGLAATQAAG
LRAQFGSAVK PLHAGLSARA GLTAVKLGLA GFEGNTQQVI DAFLAAHGDQ KQQPELLVEN
WGAPWRMLSP GLEFKRYPTC GGTHSAAEAA FALREQWHKQ NGANADMADA IEQITVTFPP
GGDVAPFIRN ATNGVEARFS LEYVIAAALI EGELKLAHFS EAPVETTISA LANRVIRRAD
ETAPPDELDP EARFHEVTLH LRNGNTLVQR TTRQETSARP TDLRAKLRQT LGSLTHLDSD
QIADRCALRH DGDLRYLLGL LF
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