Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3546 |
Symbol | |
ID | 8134526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3995248 |
End bp | 3995574 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644866847 |
Product | small multidrug resistance protein |
Protein accession | YP_003019098 |
Protein GI | 253689908 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAACG GATTCCTCTG GCTGGCACTT TCCATTGGTT CAGAAATTAC CGGCACGTCA ATGATCAAAA AAACCGATGG ATTTAAAAAA CTCTCACCTT CCGTTATCGT GATCCTCGCT TATTGCCTTT GCTATTTTTC ATTAACGCGG GCAATGGGCT ACTTACCCGT AGGGATTGCC TATTCCCTCT GGTGCGGCTT TGGCATCGTC GGCGTAACGT TTATTTCGAT GCTGCTTTAT AAACAGAAAC CGGATCTCCC CGCCGTCTTC TCTATGGCGT TAATTATCAG CGGGGGAATT ATCATGAATA TGTATTCGAG CATGTAA
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Protein sequence | MLNGFLWLAL SIGSEITGTS MIKKTDGFKK LSPSVIVILA YCLCYFSLTR AMGYLPVGIA YSLWCGFGIV GVTFISMLLY KQKPDLPAVF SMALIISGGI IMNMYSSM
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