Gene PC1_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3546 
Symbol 
ID8134526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3995248 
End bp3995574 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content45% 
IMG OID644866847 
Productsmall multidrug resistance protein 
Protein accessionYP_003019098 
Protein GI253689908 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAACG GATTCCTCTG GCTGGCACTT TCCATTGGTT CAGAAATTAC CGGCACGTCA 
ATGATCAAAA AAACCGATGG ATTTAAAAAA CTCTCACCTT CCGTTATCGT GATCCTCGCT
TATTGCCTTT GCTATTTTTC ATTAACGCGG GCAATGGGCT ACTTACCCGT AGGGATTGCC
TATTCCCTCT GGTGCGGCTT TGGCATCGTC GGCGTAACGT TTATTTCGAT GCTGCTTTAT
AAACAGAAAC CGGATCTCCC CGCCGTCTTC TCTATGGCGT TAATTATCAG CGGGGGAATT
ATCATGAATA TGTATTCGAG CATGTAA
 
Protein sequence
MLNGFLWLAL SIGSEITGTS MIKKTDGFKK LSPSVIVILA YCLCYFSLTR AMGYLPVGIA 
YSLWCGFGIV GVTFISMLLY KQKPDLPAVF SMALIISGGI IMNMYSSM