| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3539 |
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| Symbol | |
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| ID | 8134519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3986801 |
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| End bp | 3988216 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644866840 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_003019091 |
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| Protein GI | 253689901 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0326627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCATT TTAACCTTAC TGACACCCTC ATAATCGTTG GGATGATTGT GTTTTATATC
GCATTCACCT CATGGTTAAC CTACAAGCTC CGCAGTAAAT CGAACACCGA GTTCATGGAA
GGGTCACGCG CGCTACCGGC GTTTATCGTC GGTATCCTGC TGATGACTGA ATTCATCGGT
GCCAAATCCA CCATCGGTAC GGCACAGTCT GCCTTTGAGA ACGGCTTTGC CGCATCCTGG
TCGGTGATTG GTGCCGCCAT CGGCTTCCCG CTGTTTGGTA TTATTCTGGT GAAGAAGATT
TATAACACCG GGAAGATCAC CATCTCTGGC GCGATTGCCG AGAAATACGG TACCAGCACC
AAAAACATCA TTTCGATCAT CATGATCTAT GCGCTGTTGC TGGTAAACGT GGGCAACTAC
GTTAGCGGCG CGGCGGCGAT TGCCACGGTG CTGAAAGTCT CCCTGCCTGT TGCCGCGTTG
ATCACTGCGG TCGTCAGTAC CTTCTACTAC TACTTCGGTG GCCTGAAAGG AACAGCCTAC
ATCACGTTGA TCCACAGCGC CGTGAAGTAC GCTGGCGTCA TGATCATCCT GTTCGTGGCA
TTGAAAATGA CTGGCGGCTT CAAGCCAATG ATCGAACAAA TGCCGGATTA CTACTGGACG
TGGGACGGTA AACTCGGTGC CAGCACCATC TTCGCCTGGC TGATCGGGAC TATCGGTTCT
ATCTTCTGTA CGCAGTTCGT CATTCAGGCC ATTTCGTCAA CAAAAGATGC CACCAGCGCC
AAACGTGCCA CTTGGGTTGC CTTCTTCTTC TGTATGCCGA TTGCACTGGC TATCGCGGTC
ATCGGTGTCG CAGCGAAGTT TGCTCACCCT GAAATCAACA GCCTGTACGC GATGCCGGTC
TTCCTGCAAG ACATGAACCC ATGGCTCGCT GGTCTGGTCA CCACGTCACT GGTCGCCTCT
ATCTTCATCA GCGTGAGTAT GGTGGCACTG GCTATCGTTT CCCTGTTGAT TAAGGACTTC
TACGTTCCTT ACTGGAAACC GACGCCAGAA AAAGAAATGA AAATGACCCG GATCCTGTCG
CTTGTCGTGG GTTTCGCGCC GCTCGTCTTC GTTCTGTTCG TTCCTGAAAT TCTGAAGCTG
TCGTTCTTTA CCCGTGCCAT TCGTCTGTCG ATTTCCGTGG TTGCGGTGAT TGCGTTCTAC
CTGCCGTTTT TCAACAGCGC ACGTGGTGCA AACGCCAGCC TGATATCAGC CTGCGTCGTC
ACCTCGGTCT GGTACATACT CGGTAACCCA TACGGCATCG ATAACATGTA CGTCGCGTTG
ATTACTCCAG CGATCGTCAT GCTGATCGAC CGCATGATTC CGAACAAAGC GACCAAAATC
AAAATTTCTC AAACTGAAAA TAAATCAGGA GCCTGA
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| Protein sequence | MNHFNLTDTL IIVGMIVFYI AFTSWLTYKL RSKSNTEFME GSRALPAFIV GILLMTEFIG
AKSTIGTAQS AFENGFAASW SVIGAAIGFP LFGIILVKKI YNTGKITISG AIAEKYGTST
KNIISIIMIY ALLLVNVGNY VSGAAAIATV LKVSLPVAAL ITAVVSTFYY YFGGLKGTAY
ITLIHSAVKY AGVMIILFVA LKMTGGFKPM IEQMPDYYWT WDGKLGASTI FAWLIGTIGS
IFCTQFVIQA ISSTKDATSA KRATWVAFFF CMPIALAIAV IGVAAKFAHP EINSLYAMPV
FLQDMNPWLA GLVTTSLVAS IFISVSMVAL AIVSLLIKDF YVPYWKPTPE KEMKMTRILS
LVVGFAPLVF VLFVPEILKL SFFTRAIRLS ISVVAVIAFY LPFFNSARGA NASLISACVV
TSVWYILGNP YGIDNMYVAL ITPAIVMLID RMIPNKATKI KISQTENKSG A
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