Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3491 |
Symbol | |
ID | 8134471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3936557 |
End bp | 3937120 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644866792 |
Product | hypothetical protein |
Protein accession | YP_003019043 |
Protein GI | 253689853 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4282] Protein involved in beta-1,3-glucan synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.760185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAC AGTGGTCTGT TTTTGAAATA TGGCTGGAAA CGCACTGGCC TGAAGGACGC AAAGGGCTCA ATCCCCCCGC TACAGAACAA GAAATCGACG CGCTTGAACA GGCGCTTGGC ACTACGCTGC CCGACGATTA CAAAGCCTGC CTGCGTGTTC ATAACGGGCA AGATACCTAC TCAGGCGGCC TTTTCGAGAA CGCAGAATTC TTATCCACAC ACGCGGTATT GGAACAATGG GAAATTTGGC AATCGCTGCT TAGCGATGGG CAATTTGAGG GCATCCAGTC CAGCCCGGAA GACGGCATCA AAGACGACTG GTGGAACGCG AAGTGGATCC CCTTCACTCA CAACGGCGGC GGCGATCACT ACTGCCTCGA TCTCGATCCG GCGACCGGAG GCCAGCACGG CCAGATTATT ACCATGTGGC ACGACATGGA CGAGAGAGAT AAATTGTCTT CCTCGTTCGC AAACTGGTTC CAGAGCTATG TCTCTGACGT GATTGCCGGA AAGTACGTTT ACTCTGATGA ATACGGCGGG CTGACACCGA TTGATGAGCT ATAA
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Protein sequence | MNEQWSVFEI WLETHWPEGR KGLNPPATEQ EIDALEQALG TTLPDDYKAC LRVHNGQDTY SGGLFENAEF LSTHAVLEQW EIWQSLLSDG QFEGIQSSPE DGIKDDWWNA KWIPFTHNGG GDHYCLDLDP ATGGQHGQII TMWHDMDERD KLSSSFANWF QSYVSDVIAG KYVYSDEYGG LTPIDEL
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