Gene PC1_3484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3484 
Symbol 
ID8134464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3929831 
End bp3930433 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content57% 
IMG OID644866785 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003019036 
Protein GI253689846 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCATTA TGGTGAACGA TATGACAATC GATAATCAGG AAAATGGTGC GCAGGCGATT 
ACGCCCATCG CGCGGTTGGC CGTTGCTATT CGGCGGGAAC GTGAGCGGCT AAATCTGTCA
GTCACCGAAC TGGCAAAGCG TGCAGGGCTG GCAAAATCAA CGCTTTCGCA GTTGGAAACC
GGAATTGGCA ACCCAAGCCT GGAAACGCTC TGGGCATTGG CGATGGCGCT TGATGTGCAG
GTCAGCCAGC TGATTGGTCA GTCTCGTCAG CATGTGCAGG TGATTCGGGC TAACGAAGGT
GTGGCAACCT ATTCGGAGCA GGCAAACTAT GCTGCGACGC TGCTGGCGGC GTGTCCGGCA
GGCGCGCAGC GTGATATTTA TCGGCTTAAC GTACAGCCGG GGGAAGCCAG AGTCTCTCAA
CCGCATAGAC CGGGGACGAT TGAACACGTA ATCCTGAGCA GCGGTCGCGC CAGAATTGGA
CCTGTCGCAC AGCCCGTTGA ACTGAGCGCG GGGGATTACA TCAGCTACTC CGCCGACGTC
CCGCATCTGT TTGATGCGCT GGAGGCGGAT ACGAGCGCGG TGATGTTGAT TGAGCAGGGG
TAA
 
Protein sequence
MVIMVNDMTI DNQENGAQAI TPIARLAVAI RRERERLNLS VTELAKRAGL AKSTLSQLET 
GIGNPSLETL WALAMALDVQ VSQLIGQSRQ HVQVIRANEG VATYSEQANY AATLLAACPA
GAQRDIYRLN VQPGEARVSQ PHRPGTIEHV ILSSGRARIG PVAQPVELSA GDYISYSADV
PHLFDALEAD TSAVMLIEQG