Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3484 |
Symbol | |
ID | 8134464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3929831 |
End bp | 3930433 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644866785 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003019036 |
Protein GI | 253689846 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCATTA TGGTGAACGA TATGACAATC GATAATCAGG AAAATGGTGC GCAGGCGATT ACGCCCATCG CGCGGTTGGC CGTTGCTATT CGGCGGGAAC GTGAGCGGCT AAATCTGTCA GTCACCGAAC TGGCAAAGCG TGCAGGGCTG GCAAAATCAA CGCTTTCGCA GTTGGAAACC GGAATTGGCA ACCCAAGCCT GGAAACGCTC TGGGCATTGG CGATGGCGCT TGATGTGCAG GTCAGCCAGC TGATTGGTCA GTCTCGTCAG CATGTGCAGG TGATTCGGGC TAACGAAGGT GTGGCAACCT ATTCGGAGCA GGCAAACTAT GCTGCGACGC TGCTGGCGGC GTGTCCGGCA GGCGCGCAGC GTGATATTTA TCGGCTTAAC GTACAGCCGG GGGAAGCCAG AGTCTCTCAA CCGCATAGAC CGGGGACGAT TGAACACGTA ATCCTGAGCA GCGGTCGCGC CAGAATTGGA CCTGTCGCAC AGCCCGTTGA ACTGAGCGCG GGGGATTACA TCAGCTACTC CGCCGACGTC CCGCATCTGT TTGATGCGCT GGAGGCGGAT ACGAGCGCGG TGATGTTGAT TGAGCAGGGG TAA
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Protein sequence | MVIMVNDMTI DNQENGAQAI TPIARLAVAI RRERERLNLS VTELAKRAGL AKSTLSQLET GIGNPSLETL WALAMALDVQ VSQLIGQSRQ HVQVIRANEG VATYSEQANY AATLLAACPA GAQRDIYRLN VQPGEARVSQ PHRPGTIEHV ILSSGRARIG PVAQPVELSA GDYISYSADV PHLFDALEAD TSAVMLIEQG
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