Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3483 |
Symbol | |
ID | 8134463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3928776 |
End bp | 3929336 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644866784 |
Product | NUDIX hydrolase |
Protein accession | YP_003019035 |
Protein GI | 253689845 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAGATG GCAAAAGTGT AATCCTGAAA CTTAATGCTG AAATCAGCTA TCGATTTCCT ATCACAACAG ATAGAGATGA TGTGAATGCT AAACGTCTGC AATATTTTAT TGATGCGACG TCCCACCCCT TTGAACGATC CACATTAGAA GGTCATGTTA CTGGAACGGC TTTTATTGTG GATAAAGAAA GACAACACAC CCTTCTTTTA AGACATAAGA AATTGAATAT GTGGTTGCCG CCCGGCGGCC ACTGTGATGG CAATGCTGAT ATTATCGATA CCGTATTACG AGAAACACAG GAAGAGACAG GAATCGACAA CGTTAATGTT GTCTCTAATG AGATATTGGA TATCGATATT CATCTCATTC CCGCCAATCC CAAAGAGCCT GAACATTACC ACTATGACAT TCGTTTTTTG CTACAGGCTG ACAGGCATGT ACCGCTGGTT ATCAATGAGC AAGAGGCGAC AAACCTACAG TGGATAAGCA TTGACCGGCT CGAAGATTAC ACGCAGCTCC CATCGCTTTT AATACTGAGA GAGAAAATGG AGGTATTATG A
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Protein sequence | MQDGKSVILK LNAEISYRFP ITTDRDDVNA KRLQYFIDAT SHPFERSTLE GHVTGTAFIV DKERQHTLLL RHKKLNMWLP PGGHCDGNAD IIDTVLRETQ EETGIDNVNV VSNEILDIDI HLIPANPKEP EHYHYDIRFL LQADRHVPLV INEQEATNLQ WISIDRLEDY TQLPSLLILR EKMEVL
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