Gene PC1_3483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3483 
Symbol 
ID8134463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3928776 
End bp3929336 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content42% 
IMG OID644866784 
ProductNUDIX hydrolase 
Protein accessionYP_003019035 
Protein GI253689845 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAGATG GCAAAAGTGT AATCCTGAAA CTTAATGCTG AAATCAGCTA TCGATTTCCT 
ATCACAACAG ATAGAGATGA TGTGAATGCT AAACGTCTGC AATATTTTAT TGATGCGACG
TCCCACCCCT TTGAACGATC CACATTAGAA GGTCATGTTA CTGGAACGGC TTTTATTGTG
GATAAAGAAA GACAACACAC CCTTCTTTTA AGACATAAGA AATTGAATAT GTGGTTGCCG
CCCGGCGGCC ACTGTGATGG CAATGCTGAT ATTATCGATA CCGTATTACG AGAAACACAG
GAAGAGACAG GAATCGACAA CGTTAATGTT GTCTCTAATG AGATATTGGA TATCGATATT
CATCTCATTC CCGCCAATCC CAAAGAGCCT GAACATTACC ACTATGACAT TCGTTTTTTG
CTACAGGCTG ACAGGCATGT ACCGCTGGTT ATCAATGAGC AAGAGGCGAC AAACCTACAG
TGGATAAGCA TTGACCGGCT CGAAGATTAC ACGCAGCTCC CATCGCTTTT AATACTGAGA
GAGAAAATGG AGGTATTATG A
 
Protein sequence
MQDGKSVILK LNAEISYRFP ITTDRDDVNA KRLQYFIDAT SHPFERSTLE GHVTGTAFIV 
DKERQHTLLL RHKKLNMWLP PGGHCDGNAD IIDTVLRETQ EETGIDNVNV VSNEILDIDI
HLIPANPKEP EHYHYDIRFL LQADRHVPLV INEQEATNLQ WISIDRLEDY TQLPSLLILR
EKMEVL