| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3468 |
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| Symbol | |
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| ID | 8134448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3912266 |
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| End bp | 3913702 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866769 |
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| Product | glycoside hydrolase family 1 |
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| Protein accession | YP_003019020 |
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| Protein GI | 253689830 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGG TTGCACTGAC TATTCCACCT GATTTCATTC TGGGCGCGGC GGCGTCAGCA
TGGCAAACGG AAGGGTGGAG CGGCAAGAAG GCGGGGCAGG ATTCCTATCT GGATCTCTGG
TACAAGCAGG ATCGTCAGGT TTGGCACAAC GGCTACGGTC CGGCAAAAGC GACGGATTTC
TTTAATCGCT ATCGGGAAGA CGTGGCGCTC ATGAAGCTGG CCGGACTGAC GCACTACCGT
ACGTCGATCA ACTGGTCACG CTTTATGCTG GACTATGAGA AAGGCGTGGT GGATGAGGAA
TACGCGGCCT ATATCGATAA CCTGCTGGAT GAGATGCACC GGCAGGGGAT CGAACCGATG
ATCTGCCTTG AACATTATGA ACTGCCCGCC TGTCTGCTGG AGAAGTATCA GGGCTGGTCA
TCTAAGCAGG TGGTGGAGTG GTTTGTGCTA TACGCCGAGG CGGTTTTTGC CCGTTATGCC
GGAAAAGTGA AGCGCTGGTT TACCTTCAAT GAGCCGATTG TGGTGCAGAC GCGCGTTTAT
CTGGACGCGC TACGCTACCC TTATGAGCAA AACACGCACA CCTGGATGCA GTGGAATCAC
CATAAGAATC TGGCGACGGC GAAAGTGGTG CAGCGCTTTC GGCAGAAAGG CTATCACCGG
GATGGCGGCT CGATCGGCGT GATCCTCAAT CCCGAAGTGA CGTATCCACG ATCCCGTGCC
GCGCACGATG TGAAAGCCGC GCACCTTTAC GATCTGTTCT ATAACCGGGT TTTTCTCGAT
CCGGCATTAA AAGGCGAATA TCCGGCGGAG CTGGTGGCGT TGCTGTCACA GCATCAGGTG
CAGTGGGATT ACACGGAGGA AGAGCTGGCG ATCATTCGGG ATAACACGGT CGATGAAGTA
GGAATCAACC TGTATTACCC GCATCGGGTC AAAGCACCCA GCCGTGAGTG GAACAAGGAG
ACGCCGTTCC ATCCGGCCTA TTACTACGAG CATTTTGAGC TGCCGGGGCG TCGTATGAAC
ACCTCGCGTG GCTGGGAGAT CAATCCCAAA ATCATTTACG ACATGGCGAA ACGCATGGAG
CGTGACTACG GCAACGCGCC GTGGTTTGTG GCGGAAAACG GCATCGGTAT TGAGAACGAA
GCGCGCTTTA AAGACGACAA GGGGGTGATT CAGGACGATT ACCGCATCGC CTTTATTGCC
GAACACCTTT ACTGGACGCT GAAGGCGAAG GAAGAGGGGG CAAACTGCCG CGGCTACATG
CTGTGGGCGT TTACCGATAA CGTCTCGCCG ATGAACGCGT TTAAAAACCG CTACGGATTG
ATCGAAATCG ATCTGGAGCA GGATCGGCAG CGGCGGCCGA AAAAATCCGC TGCATGGTTT
CGCCAGCTAC ACGACACGCG TCGGCTTGAA TTGACGCTGG ATGATGAAGA GAAATAG
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| Protein sequence | MSKVALTIPP DFILGAAASA WQTEGWSGKK AGQDSYLDLW YKQDRQVWHN GYGPAKATDF
FNRYREDVAL MKLAGLTHYR TSINWSRFML DYEKGVVDEE YAAYIDNLLD EMHRQGIEPM
ICLEHYELPA CLLEKYQGWS SKQVVEWFVL YAEAVFARYA GKVKRWFTFN EPIVVQTRVY
LDALRYPYEQ NTHTWMQWNH HKNLATAKVV QRFRQKGYHR DGGSIGVILN PEVTYPRSRA
AHDVKAAHLY DLFYNRVFLD PALKGEYPAE LVALLSQHQV QWDYTEEELA IIRDNTVDEV
GINLYYPHRV KAPSREWNKE TPFHPAYYYE HFELPGRRMN TSRGWEINPK IIYDMAKRME
RDYGNAPWFV AENGIGIENE ARFKDDKGVI QDDYRIAFIA EHLYWTLKAK EEGANCRGYM
LWAFTDNVSP MNAFKNRYGL IEIDLEQDRQ RRPKKSAAWF RQLHDTRRLE LTLDDEEK
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