| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3415 |
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| Symbol | |
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| ID | 8134395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3859438 |
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| End bp | 3863460 |
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| Gene Length | 4023 bp |
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| Protein Length | 1340 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866716 |
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| Product | hypothetical protein |
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| Protein accession | YP_003018967 |
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| Protein GI | 253689777 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGATG AAAAAAAAGC ACAGGATGCC GCGGCAGAAG AAAGCGTTGC GCAGGATAAC
GTGCAAACGA CGCCAGCGCG AAAAGGGCGC TGGTGGAAAC GTATCGGCAT TGGTATCGCC
GCATTCTTGT TGCTGCTTGT TATTGGCGTA GGGCTGCTGG TGGGCACTAC GCCGGGTCTG
CACCTGTTGC TGAATACCGC AGCACGCGTG GTGCCGGGGC TGGACATTGC CAGCGTGAGC
GGCGGCTGGC GTGATTTAAC GCTGAAAAAT GTCAGCTACG AGATGCCGGG CGTGACGGTA
AAGAGTGATG AATTTCACCT GTCGCTCGCG CTGGGGTGTC TGCGCAAAAG CCAGCTGTGC
ATTAACGATC TCTCGGCGAA CCGCGTCGAT GTGGTTGTGG ATACCAAAGC CCTGCCTGTG
ACGGAAGAGC CACCGCCGCC TTCGACTCCA GTCACTGAAA TCTCCGCACC TTTCCCTATC
TCTCTACGTC AACTCGTGCT CAATAGCGTC CAGGTTACCG TGGATGACAC GGCGATTTCT
CTGGGCGAAT TCCGCACCGG AATGCAGTGG GAAGGGCGCG CATTGACGCT GCTGCCGACC
AAAATCAGCG CACTGCTGGT GACTTTACCG AAAACCCCTG TCGATGTGCT GGAAGATGGC
AAAGTGACGG CGGCGGAAAT GGCGTCCGTC ATCAAAGAAA CGGCGGCGAA CGTACGTGAG
GCGGCTGAAC AAGGCTCTTC GCAAACGCTT CAAATCGATA AAGTGCTAGA GGCGAATAAT
ACGGTAGCGG CCGCCACGAC GACGACACCG ACAGCGTCGA CGCCAAAAAC GGATGGCGCC
GCTGACAAGC CGGCAGTCCC TGAACAGCCG CTGGGCGAAC GCCTGAGCGA GCTATTCTCC
AAACCGCTAT TACCGGATTT ACCGCAGTTC ACGCTGCCGT TGGATCTGAA TATTGTTGAG
ATCCACGGTG AACAGCTGCG GCTGACGGGC GATCAGGACA TTGTGATTAA TAACCTGTTC
GTGCAGGCGT CGACCCAGCA ACAGCATTTG CGACTGGACA AACTGATCGT GCAATCGCCG
CAGGGTGGGT TGAATGTACG CGGTGAAGCG ACGCTTAGCG ATAACTGGCC CGTCTCGCTG
ACGGCGAACG GCGTGCTGAA TGTCGATCCG CTCAAAGGCG AAACGTTGAA ACTGGCGGTC
GATGGCGGCC TGCGTGAACA GCTGAATGTG GCACTGAATC TTTCTGGGCC GCAGCGCGCC
CAGTTGGATT TGCAGACCAA ACTGGCGGAA ACCGGGCTGC CGCTGGCGTT GACGTTGCAA
ACCGAGCGTG TGCGCTGGCC GCTGACGGGT ACAACGCAGT ATCAGGCCAG TAACGTCAGG
CTGCGTTTTA ATGGCAAAGT GACCGACTAC GCGTTATCGC TGCGCGGCGA TCTGAGCGGT
GCGGATATTC CTCCCGCGAC GCTGCTGCTG GATGGCAAAG GCAACGAGCA GCAGTTTACG
CTGAGCCGCT TGCGGCTGGC GGCGTTGCAG GGGAATGCCG ATCTGAGTGC GCTTATCGAC
TGGAGCAAAG CGATAAGCTG GCGCAGTGAG CTGCTGCTGA ACGGGATTAA CACCGCGAAA
CAGTGGCCTG AATGGCCTGC GAAAATAGAC GGCAAGATAA CAACGCGCGG TAGCGTCTAT
GGCGGTAGCT GGCAGTTGCA GGTGCCGGAA CTGCGGCTGG ATGGCAACGT GAAAGCGAAT
AAGCTCACGG CCAGAGGTGA ACTGCGTGGC AATGCGGCAG GCCAGTGGAC AATACCAGGG
CTGAATCTGG CATTAGGCCG CAACCAGTTG AATGTCAAAG GTGACCTGAG CGACAAATGG
CAGTTGGATG CAGACATCAA TGCGCCATCG CTGGACGGTA TGTTGCCGGG TCTGGCAGGA
CGCGCCATCG GGACACTCAA GCTACGCGGC AATCTGCGTG AACCGCAGAT GCTGGCGGAT
ATCACCGCTT CCGGCCTGCG CTGGCAGGCA ATAACGATAA GTCAGGTGAG AGTAGAAGGC
GATGTGCGCT CCGAACAGCA GATTCAGGGT AAGCTGGCCG TGCGCCTCGA AGCGCTGAAG
CAGGATGGTC TGAATATTGC GCTGTTGACG CTGGATGCCA GCGGCAATGA AAAGCAGCAC
CAGCTTCGGC TGAATATGCA GGGTGAACCC GTCGCGGGGC AACTGGCACT TTCAGGCAGC
TTCGATCGTC AGGAACAGCG CTGGCGCGGT ACGCTGAACA ATACCCGCTT CGACACCCCT
GTCGGTGAAT GGCGTCTGAC GCAGGATATG GCGCTGGACT ACCTGAATAC GCAGCAGAAG
ATCACCATCG GGACACACTG CTGGCGTAAC CCGAACGCAG AACTGTGCGT ACCGAAAGCG
ATTGAGGCCG GACCGAGCGG ACAGGCAAGT ATCCGATTGA ACCGTTTCGA TCTCGCTATG
TTAAAGCCGT TCCTGACGGC AGATACCGTG CTGGCGGGGA CGTTTACCGG TGGTGCGGAT
ATCAGTTGGC AGGCGGGGCA AGGCTTACCA CAGGCGAAAG TGTCGTTGGT GGGCAACGGT
GTGAGCGTTC GTCAGCAGAT GCAGGGCAAC ACGCTGCCGA TTGATTTCGA TACCTTTACG
CTGAATGCCG GGCTCGATCG CGGGCGGGCG CAGCTTGGCT GGCTGATGGC GATCCGGGAG
AACGGGCGTT TCAGCGGTGA TATTCAGGTG ACCGATCCAC AAGGGCGGCG CAATCTCGGC
GGTAATGTCA CAATTAACAA TATTTCGCTG GCGTTGCTCA ACCCTGCGTT GAGTAAAGGA
GAGAAAGCGG CAGGGATACT GAATGCGAAC CTGCGCTTGG CAGGGGATGC GGCACGTCCT
CAGATCTTTG GCCAGATGGT GCTGGAGCGA TTGGATATTG ATGGCAACTG GATGCCGGTT
GATCTGACCA ACGGGCGGCT GGCGGTAAAT TTCAGCGGGA TGTCATCAAC GCTGCAAGGC
TTCCTGAAAA CGGATAACGG ACAGTTGAAC CTCGGTGGGA ATGCCGACTG GTCGCGGCCT
GATGCGTGGC GTGCGCGGAT TGCGGCGAAA GGCCAGAAGC TGAGGGTGAC GATTCCACCG
ATGGCGCGGC TGGATGTCTC GCCGGATATT GTCTTCGAGG CTACGCCGCA GCTGTTTGCG
TTAAACGGTT CGGTCAGTAT TCCGTGGGCG CGCATTGTGG TTAAAGATAT GCCGGAAAGC
GCGGTGGCGG TGTCATCGGA TGAAGTGATG CTGGATGCCC AGCGCCAGCC GCTGAAGAAA
GCCAGTGCGG CGATTCCGAT TAATAGCAAT CTGACAATCC GCGTCGGAAA TGATGTGCGG
CTGGATGCGT TCGGCCTGGC TGCCCGCTTG CAGGGCGACC TGAAAATGGT TCAGGACGAA
CGCGGACTGG GGCTGAACGG GCAAATCGAT ATTCCGTCCG GCCGTTTTAA AGCCTACGGG
CAGGATCTGA TCGTCCGCAA AGGGCTGATT CTGTTCTCTG GCCCGCCTGA TCAGCCGATC
CTGAATATCG AAGCCGTTCG TAACCCAGAC AACACCGCTG ATGACGTCAC CGCCGGGGTG
CGTGTCACCG GCATGGCCGC CACGCCGAAG CTGGAAGTCT TCTCCGATCC GGCAATGTCG
CAGCAGGAAG CACTCTCTTA TCTGCTGCGT GGACAGGGTT TGGACAGCGG TGGAGCCGAT
AGCTCGGCAA TGACCTCAAT GTTAGTCGGT TTAGGGGTTG CACAAAGTGG TCAAGTTGTG
GGTAAAATCG GCGAGGCCTT TGGCGTAAGT AATTTAGCTC TGGATACACA GGGTGTTGGC
GATAATTCTC AGGTTGTCGT CAGCGGCTAC GTCCTTCCGG GTCTGCAAGT GAAATATGGT
GTTGGCATAT TCGATTCTTT GGCAACGTTA ACGCTGCGTT ACCGCTTGAT GCCAAAGCTA
TACTTGGAAG CGGTGTCTGG AATTAGCCAG GCATTAGATG TGCTCTATCA GTTTGAGTTT
TAG
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| Protein sequence | MMDEKKAQDA AAEESVAQDN VQTTPARKGR WWKRIGIGIA AFLLLLVIGV GLLVGTTPGL
HLLLNTAARV VPGLDIASVS GGWRDLTLKN VSYEMPGVTV KSDEFHLSLA LGCLRKSQLC
INDLSANRVD VVVDTKALPV TEEPPPPSTP VTEISAPFPI SLRQLVLNSV QVTVDDTAIS
LGEFRTGMQW EGRALTLLPT KISALLVTLP KTPVDVLEDG KVTAAEMASV IKETAANVRE
AAEQGSSQTL QIDKVLEANN TVAAATTTTP TASTPKTDGA ADKPAVPEQP LGERLSELFS
KPLLPDLPQF TLPLDLNIVE IHGEQLRLTG DQDIVINNLF VQASTQQQHL RLDKLIVQSP
QGGLNVRGEA TLSDNWPVSL TANGVLNVDP LKGETLKLAV DGGLREQLNV ALNLSGPQRA
QLDLQTKLAE TGLPLALTLQ TERVRWPLTG TTQYQASNVR LRFNGKVTDY ALSLRGDLSG
ADIPPATLLL DGKGNEQQFT LSRLRLAALQ GNADLSALID WSKAISWRSE LLLNGINTAK
QWPEWPAKID GKITTRGSVY GGSWQLQVPE LRLDGNVKAN KLTARGELRG NAAGQWTIPG
LNLALGRNQL NVKGDLSDKW QLDADINAPS LDGMLPGLAG RAIGTLKLRG NLREPQMLAD
ITASGLRWQA ITISQVRVEG DVRSEQQIQG KLAVRLEALK QDGLNIALLT LDASGNEKQH
QLRLNMQGEP VAGQLALSGS FDRQEQRWRG TLNNTRFDTP VGEWRLTQDM ALDYLNTQQK
ITIGTHCWRN PNAELCVPKA IEAGPSGQAS IRLNRFDLAM LKPFLTADTV LAGTFTGGAD
ISWQAGQGLP QAKVSLVGNG VSVRQQMQGN TLPIDFDTFT LNAGLDRGRA QLGWLMAIRE
NGRFSGDIQV TDPQGRRNLG GNVTINNISL ALLNPALSKG EKAAGILNAN LRLAGDAARP
QIFGQMVLER LDIDGNWMPV DLTNGRLAVN FSGMSSTLQG FLKTDNGQLN LGGNADWSRP
DAWRARIAAK GQKLRVTIPP MARLDVSPDI VFEATPQLFA LNGSVSIPWA RIVVKDMPES
AVAVSSDEVM LDAQRQPLKK ASAAIPINSN LTIRVGNDVR LDAFGLAARL QGDLKMVQDE
RGLGLNGQID IPSGRFKAYG QDLIVRKGLI LFSGPPDQPI LNIEAVRNPD NTADDVTAGV
RVTGMAATPK LEVFSDPAMS QQEALSYLLR GQGLDSGGAD SSAMTSMLVG LGVAQSGQVV
GKIGEAFGVS NLALDTQGVG DNSQVVVSGY VLPGLQVKYG VGIFDSLATL TLRYRLMPKL
YLEAVSGISQ ALDVLYQFEF
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