| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3317 |
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| Symbol | |
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| ID | 8134290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3737141 |
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| End bp | 3738547 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644866611 |
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| Product | amidase |
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| Protein accession | YP_003018869 |
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| Protein GI | 253689679 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02715] amidohydrolase, AtzE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTAT ACGCCCGAAA CGCGTCCTCA TCGCTCTCGA TCCGGCAAAT ACAACAAGGT
TTGCAGGCTG GCACGTTCTC CGCGAGAGAG CTGGCACAGC AGACGCTGGA CGCGATTGAG
CAAGCCAATC CCACCATCAA TGCCTACACC AATGTCACTG GCGAACGTAT GCTGGCAGAA
GCTGAATGTA TCGACACGCG CCGCCAACGT GGAGAAACGT TACCGCCGCT GGCTGGTGTG
CCTTACGCCG TCAAGAACCT GTTTGATGTC AGCGGTGAAA CCACGCTGGC AGGTGCCGAG
ATTTTCAGCC AGCGCCCACC CGCTACGCAG GATGCTTTTG CCATCCGCCA GCTTGCCAAC
CAGGGGGCTC TGCTGTCCGG CATGTTGAAT ATGGACGCCT ATGCCTATGG CTTTACCACC
GAAAACAGCC ATTACGGCCC CACGCGTAAT CCGCTCGACA CACAGCGCAT CGCCGGCGGA
TCGTCTGGCG GGTCGGCAGC GGCCGTCGCG GGCGGGCTGG TTAACTTCAC ACTCGGCAGC
GACACCAATG GTTCGATCCG CGTGCCGTCG TCGCTCTGCG GCATTTTCGG GATGAAGCCG
ACATTTGGTC GCTTATCACG CCACGGTAGC CACCCGTTTG TCGCCAGCCT CGACCACATC
GGCCCACTGG CGCGGCGTGC GGACGATCTG GCATTAGTGT TCGACACCTT ACAAGGTCGC
GATAAGCACG ATCGTTTTCA GGCTAATCAG GAAGCACGGC ATACCTCAGA GCAGTTGGAA
ATCGGCAGCG AGGGATTGCG CTACGCGGTG CTGGATGGCT ATTTCTCTAC CTGGGCCAGC
GAGGAAGCCA ACGCCGCCGT GCGCCAGATC GCACAGGCGC TGGGCGCACA GGAGAGCCTG
ACGCTAACCG ATGCCGCACT GGCACGCAGC GCCGCCTTTA TTCTGTCAGC CAGCGAAGGC
GGGAACCAGT ATCTGCCTGA CTTACGTACT CAGTCTGAGC GTTTCGAACC GCTGTCACGC
GAGAGGCTGC TGGCTGGCGC GATGATCCCC GCCGCCTGGT ATGTGCAGGC ACAGCGCTTC
CGTAACTATT TCCGCCAACA GACACTGGCG TTGTTTGAAC ATACCGACCT GCTGATCGCC
CCTGCAACCC CCTGCTCCGC CACGCTCATC GGGCAGGAAA CCATGCGCAT TAATGATACC
GACCTGCCCG TGCGCGCCAG TATGGGTATG CTGACACAGC CGATCTCTTT CGTCGGGCTG
CCAGTCGTAA CGGTGCCGGT GGCGACCGCC AACGGCTTAC CGATAGGCGT GCAGATTATT
GCCGCACCGT GGCGCGAGGA CCTGTGTTTG CGGACGGCAT GGGCGCTTGA GCAGCAGGGC
ATAACTTATA CCCGTCATAC TTCATGA
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| Protein sequence | MSLYARNASS SLSIRQIQQG LQAGTFSARE LAQQTLDAIE QANPTINAYT NVTGERMLAE
AECIDTRRQR GETLPPLAGV PYAVKNLFDV SGETTLAGAE IFSQRPPATQ DAFAIRQLAN
QGALLSGMLN MDAYAYGFTT ENSHYGPTRN PLDTQRIAGG SSGGSAAAVA GGLVNFTLGS
DTNGSIRVPS SLCGIFGMKP TFGRLSRHGS HPFVASLDHI GPLARRADDL ALVFDTLQGR
DKHDRFQANQ EARHTSEQLE IGSEGLRYAV LDGYFSTWAS EEANAAVRQI AQALGAQESL
TLTDAALARS AAFILSASEG GNQYLPDLRT QSERFEPLSR ERLLAGAMIP AAWYVQAQRF
RNYFRQQTLA LFEHTDLLIA PATPCSATLI GQETMRINDT DLPVRASMGM LTQPISFVGL
PVVTVPVATA NGLPIGVQII AAPWREDLCL RTAWALEQQG ITYTRHTS
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