| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3314 |
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| Symbol | |
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| ID | 8134287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3734294 |
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| End bp | 3735133 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866608 |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_003018866 |
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| Protein GI | 253689676 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAA TAGATGAACG ATTACGGGAT CGCTACGGCG AACTTTCCCC GCAGGAACAG
CGCGTCGCGG ATTTCATCTT TGATCACTTT GACGATCTGA TTAGCTACAA CAGCGCTGAA
TTGGCGCGGT TGAGCGGTGT TTCCAAAGCG ACCGTCAGCC GATTGTTCAA ACGATTGGGT
TACCCCAGCT ACCGCGATAT GCGCGATGAG CTCAGAACGC TGCGCCAGAG TGGGATGCCG
CTGGCGGATA ACCGCGATGC TGTGCAGGGC AATACGCTGC TGGCACGGCA CTACAAACAG
GAAATGGCGA ACCTGACACA GTGGATAAAC CAGATTGATC CCGTGCAGTT TGGTGCGGTG
ATTCAGGCGT TGATGCAGGC GCAACGCCTG TGTCTGATTG GTCTGCGCAA TAGCTATCCA
GTGGCGCTGC ATTTGCGCCA ACAGCTACTC CAGATTCGCC AACAGGTCAC GCTGCTGGCG
CAGCCGGGGC AGACGCTCTC CGAAGAATTG GTTGATCTCA CGGCGCAGGA TGTCGTGATT
GTGGTGGCCT TTCGCCGTCG TCCGCGCCTG ATTCAGTCAC TGCTGGTGCA ACTGCAAAAA
CGTGGCGTGC CCGTGCTGCT GCTGTGTGAA CCGCAGGCCA GTGCGCTGAT ATCACTGGCA
ACCTGGTCGT TGTGCGTCCC GCTGGACAGC GTCTCGGCGT TTGATAGCTA TTCATCCGCC
ATGAGTCTGG TGAACGTCAT TAGTAACGCG CTACTGCATG AAATGCTGCG TGACGGACGC
CAGCGCATCC ACCAGATCGC GGATCTTTAT AGTGAACTGG ATGAGCTTGA GCAACGCTAA
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| Protein sequence | MMQIDERLRD RYGELSPQEQ RVADFIFDHF DDLISYNSAE LARLSGVSKA TVSRLFKRLG
YPSYRDMRDE LRTLRQSGMP LADNRDAVQG NTLLARHYKQ EMANLTQWIN QIDPVQFGAV
IQALMQAQRL CLIGLRNSYP VALHLRQQLL QIRQQVTLLA QPGQTLSEEL VDLTAQDVVI
VVAFRRRPRL IQSLLVQLQK RGVPVLLLCE PQASALISLA TWSLCVPLDS VSAFDSYSSA
MSLVNVISNA LLHEMLRDGR QRIHQIADLY SELDELEQR
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