Gene PC1_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3292 
Symbol 
ID8134265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3709919 
End bp3710719 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content59% 
IMG OID644866586 
Producthelix-turn-helix domain protein 
Protein accessionYP_003018844 
Protein GI253689654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCAA ATTCGTTTAT GTCTGCCAGT TCTCTGAGCG GCCCAAAGGC GCTGGGGGCT 
TTCTTACGGG CACTGCGTGA GCGGACCTCG CCGGAAAGGG TCGGCTTGCC CGCGTCCGGT 
CGGCGGCGCA CCAGTGGATT ACGCCGCGAA GAGTTGGCGC AAATCGCCCG CATCAGCACC 
ACCTGGTATA CCTGGCTTGA GCAGGGGCGT GATGTGTCCG CTTCCGCCTC GGCGCTGACT 
CGCTTGTCGC AGGCGTTAAA GCTGGAACCC GCAGAGCATG ACTATCTTTT TAGTCTGGCT 
GGCGTACAGG ATCCTCAGAA GCAGGGTAGG GCAATGTCGC TCGATGCGCG GGTTGCCGCC 
AGTCTGCACC ATATTACCTG TCCTGCGTAT CTTCTGGATG GCAACTGGAA CATGCTGGCG 
TGGAATGCGC CGTCGGAACA GCTGTTCGCC GGATGGCTGG GAAACGATCC TGAACCGAAT 
CTGCTGCGCT TTATGTTTCT TAACCCGCTG GCACGATCGC TGGTCGCTGA TTGGCCGGAA 
CGTGCCAGAC GAGTGGTGGC GGAGTTTCGG GCGGAGTCCA GCCATTATGC GTCTGTCGAG 
TCCGTTCGAC ACGTGGTGAT GGCGCTGTGT GAAGAAAGCC GCGAGTTCAA TCTCTGGTGG 
TCACAGCAGG CGGTAACTGC CCGTGAAGGC GGCGAGCGAC GTTTCCACCA CCCTCTGCTG 
GGAGAGGTCG CCTATCATCA GCAGACTTTC CATCCTGCCG GACAGGGGGA ATTTAAGTTG 
GTGATGCTGA TCGCGCAGTA A
 
Protein sequence
MSANSFMSAS SLSGPKALGA FLRALRERTS PERVGLPASG RRRTSGLRRE ELAQIARIST 
TWYTWLEQGR DVSASASALT RLSQALKLEP AEHDYLFSLA GVQDPQKQGR AMSLDARVAA 
SLHHITCPAY LLDGNWNMLA WNAPSEQLFA GWLGNDPEPN LLRFMFLNPL ARSLVADWPE 
RARRVVAEFR AESSHYASVE SVRHVVMALC EESREFNLWW SQQAVTAREG GERRFHHPLL 
GEVAYHQQTF HPAGQGEFKL VMLIAQ