Gene PC1_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3280 
Symbol 
ID8134252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3693835 
End bp3694950 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content31% 
IMG OID644866573 
Producthypothetical protein 
Protein accessionYP_003018832 
Protein GI253689642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTAA AAGAATTTCC TTGTAAAGCA TCAACTATAT TTGATAAAAA TATTAATTTT 
TTGTTCGGTT CTGGTGCGTC GGCGGCCTAT ATTCCGACAT TGTGGTTATC AGAAGATACA 
ACATATGAAA CTCTCTTGAC TAGCGAGGCT TGTGCAGATG TAAAAGATTT TATTTTATCT 
GCTTATTTTA ATAAAATAAT CAGAAAGGCT TTTTGTGTGC CGCCAAATGT AAATAGTGAA 
AAATACAATT CAACCTTGAA AAGTTACTCT AATTTTATAG ATGAGTTGGT GAGGCTTTTG 
GAGAAAAAGG GAACCAATCA AATCAGAAGG GCAAATATAT TTACAACGAA TTATGATCTT 
TTTTTTGAAA CGGCTGCAGA TAAATCATTA GAAAATAAAA TATTCCATTT TAATGATGGT 
GCTTTAGGCT TTAAAAAAAG AAGGCTTAGT ATCAGTAATT TTCATATTAC TACTTGGCAT 
CAAGGTACCC ATGATATGTA TAAACATGAG TTGCCAACAG TAAATCTTAT TAAAATGCAT 
GGTTCAGTGT CATGGAATCG GGATGATAAT GAAATCATAA ATATAGATTA CCCCATAAGA 
ACACCTGAGA GAATTAGATT GGAAAATGAT AATACAATTG CCGATCTTGT TGATGCATTT 
AATCATACTA ATGATGATCT TAAGGATTTT CTCAATTTGA ATGATTCTGA TATGGAGGTT 
TTAAATGATT TCAAAGATTT TTATAACACT CTCGCCATTG TAAATCCAAC AAAAGAAAAG 
TTTTCAGAAA CAGTTTTTCA ACAGCATTAC TATCAAAGTC TTAGGCTTCT TAGTTATGAA 
TTAGAGAAGC CTCAAGCTGT ATTGATTTGT TTTGGGTTTT CATTCCAGGA TGAGCATATC 
CTCGAAATAA TAAAGCGGTC ATTGAGTAAC CCCACTTTAA AAGTTTTCGT ATTTTGTTAT 
GACTTTGAAA GCAAAAGGAA AATTGGTGAT CTTATCAAGG ATGTAAGAAT AACCTTGATA 
TATCCAAAGG AAAAAGAACA TAAAATAACT TTTGATACAT TTAATGATAG GGTTTTTAAG 
TCTGAAAATG GGGATTGGGT CACATGGACG AATTAA
 
Protein sequence
MNVKEFPCKA STIFDKNINF LFGSGASAAY IPTLWLSEDT TYETLLTSEA CADVKDFILS 
AYFNKIIRKA FCVPPNVNSE KYNSTLKSYS NFIDELVRLL EKKGTNQIRR ANIFTTNYDL 
FFETAADKSL ENKIFHFNDG ALGFKKRRLS ISNFHITTWH QGTHDMYKHE LPTVNLIKMH 
GSVSWNRDDN EIINIDYPIR TPERIRLEND NTIADLVDAF NHTNDDLKDF LNLNDSDMEV 
LNDFKDFYNT LAIVNPTKEK FSETVFQQHY YQSLRLLSYE LEKPQAVLIC FGFSFQDEHI 
LEIIKRSLSN PTLKVFVFCY DFESKRKIGD LIKDVRITLI YPKEKEHKIT FDTFNDRVFK 
SENGDWVTWT N