| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3258 |
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| Symbol | |
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| ID | 8134230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3676509 |
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| End bp | 3677264 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644866555 |
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| Product | CRISPR-associated RAMP protein, Csm3 family |
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| Protein accession | YP_003018814 |
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| Protein GI | 253689624 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02582] CRISPR-associated RAMP protein, Csm3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACTGA AAAATATCCA GACGTTACGC GCCACTCTGG TGTGTGAAAC CGGGTTACAC
ATTGGCGGTG GCGACACCGC GTTGCAGATT GGCGGCATCG ACAGCGCTGT GGTGCGCCAT
CCGTTGACCC AGCAGCCTTA CATTCCCGGT TCCAGCCTGA AAGGCAAACT GCGCAGCCTG
CTCGAATGGC GCGCTGGTGT GGTGGGCGAA ACAGAAGGCA AGGTGCTCAG TCATCAGGTT
TACCAGAAAC TGATCGACGA TAAAAAACAG GCACAGGCAC TACAAGCACT GAAAATCCAG
CAACTGTTTG GCGTCAGCGG CGGTGACAAG CTTTCCTCCG AACAAGCCCA ACAGGTCGGT
CCGACTCGCC TGTCCTTCTG GGACTGCGAA TTTGACCAAC ACTGGCTGGC GCAGCAAGGC
GGGCACGTCC AGACCGAAGA GAAAGCGGAA AACTGTATTG ACCGCATCAG CGGCGTGGCG
CTGTACCCGC GCTTTATCGA ACGCGTGCCT GCCGGCAGCC GCTTTGCCTT TCGTCTTACC
GTTCGCCAGC TTGATGGCGA CAGCCCCGAC CTGCTCGACA CCCTGCTGGC GGGCCTGAAA
ATGCTGGAGC TGGACGGGCT GGGCGGCAGC ATTTCCCGTG GGTATGGCAA AGTGCGCTTT
GAAGCACTAA CTCTCGATGG AGAAGACCTC CAGCCGCGCT TTGAGCAGTT ACAGCCGTTT
GCCACCGCGC CCGTACACAC CGCACAGGGA GCCTAA
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| Protein sequence | MQLKNIQTLR ATLVCETGLH IGGGDTALQI GGIDSAVVRH PLTQQPYIPG SSLKGKLRSL
LEWRAGVVGE TEGKVLSHQV YQKLIDDKKQ AQALQALKIQ QLFGVSGGDK LSSEQAQQVG
PTRLSFWDCE FDQHWLAQQG GHVQTEEKAE NCIDRISGVA LYPRFIERVP AGSRFAFRLT
VRQLDGDSPD LLDTLLAGLK MLELDGLGGS ISRGYGKVRF EALTLDGEDL QPRFEQLQPF
ATAPVHTAQG A
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