| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3255 |
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| Symbol | |
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| ID | 8134227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3671740 |
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| End bp | 3672243 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644866552 |
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| Product | type VI secretion protein, VC_A0107 family |
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| Protein accession | YP_003018811 |
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| Protein GI | 253689621 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG GAACTGACGG TGCATCTGTC GCACCAAAGG AACGTATTAA TATCAAATAT
GTTCCAGCCA CTGGTGGTCA GCAGGCGGAA ATAGAATTGC CGTTGACGCT GATGATCGTG
GGAAATATGA AAGGGCGCAC AGAGGAAACG CCGATCGAAG AACGTCAGAC CGTCTCGATC
GACAAGAACA ACTTTACCTC GGTGATGAAA GAAGCAGAGC TGGAACTGAA TTTCAGTGTG
CCAAACCGCC TTGAAGAAGA AAGCCAGGAT GACCTGCCAG TGAAACTGAG CATCGGCGGT
CTGAATGATT TCTCCCCTGA CCGTATCGCC CAACAGGTGC CTGAGTTGCG TAAGTTGCTT
GATTTACGTG AGGCGCTGGT TGCGCTGAAA GGCCCCCTCG GCAATATTCC CTCATTCCGT
AATCGTTTGC AGGATCTGTT GTCCAGCGAA GAAGCCAGAG AGCAGCTTTT GAAAGAGCTC
GATCTGGTAA AACCCGCCGA ATAA
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| Protein sequence | MAKGTDGASV APKERINIKY VPATGGQQAE IELPLTLMIV GNMKGRTEET PIEERQTVSI
DKNNFTSVMK EAELELNFSV PNRLEEESQD DLPVKLSIGG LNDFSPDRIA QQVPELRKLL
DLREALVALK GPLGNIPSFR NRLQDLLSSE EAREQLLKEL DLVKPAE
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