Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3253 |
Symbol | |
ID | 8134225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3669792 |
End bp | 3670223 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644866550 |
Product | type VI secretion system lysozyme-related protein |
Protein accession | YP_003018809 |
Protein GI | 253689619 |
COG category | [S] Function unknown |
COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCTC TTTCTGCCTG GGAAAGGGGA AACGCGGCAA GTCTGTTTGA TCGTATCCGT GGGGAGGAGC GCCGCTCCTC CCCAGAAACG GAAGTTGAAG CACTGATCGA GTCCGTTAAG CGTCAACTGG ACAATGTGCT CAATACCCGG CCCGGAAATT GTCGCAGCGC ACCTGAGCTT GGCGTGATTG ATTTTAATGA CGCGACGCAG GGTGGGGCGG ACATTCGAGG GAAAATCCGG GAGGCGATCC GGCAGTGTAT CTGTCGCTTT GAACCTCGAA TTGTTCATGT GGATGTCGAC GCATCGGACT ATTTATCGAA TCCGATGGAG ATGTCGTTTC AGGTTACCGC GCATGTCAGA TTGGAAGATC TGGAGCAGGT CACCTCTTTC AATATCCACA TGGATAGCCA CCGCCATTAC AGAATGATCT GA
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Protein sequence | MPSLSAWERG NAASLFDRIR GEERRSSPET EVEALIESVK RQLDNVLNTR PGNCRSAPEL GVIDFNDATQ GGADIRGKIR EAIRQCICRF EPRIVHVDVD ASDYLSNPME MSFQVTAHVR LEDLEQVTSF NIHMDSHRHY RMI
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