| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3243 |
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| Symbol | |
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| ID | 8134215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3657037 |
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| End bp | 3658461 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644866540 |
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| Product | type VI secretion-associated protein, VC_A0119 family |
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| Protein accession | YP_003018799 |
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| Protein GI | 253689609 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGCAC ATCCCTGGTG TAAACGCCTG CAAACCTCGT TACCGGATGA GATGTTGCGC
GCGGCGGTAT TGCCTGACGA TCCGCTCTGG GAAAAGGTCG AGACGGAGTT GGTCAAGCTG
GGATCGCTGG CGCATAACCA GGTCGACCTT AACGTAGTCG CGGGTTATTG CCTGACCTTG
CTGGAAAGCA AAACCAAAGA CATGCGGGTA TTGGTGCAGC TGCTGCGCTG CTTACAGCAC
CCGGCCAAAG CAACACCGTT TTCTACCGCG CTGATGCTGC TGGACAGCTG GCTGGAGAGT
TATTGGGCGA TCGCCTGGCC TGCCAGTCCG GTTCAGAAGC AGAAGCTGAT GATCCAGATT
ATTCGGCGTT TTGAGAGCGT GCTTCCGCGT ATTGCAGAAA GCGGATCCAG CGCAGAGCTG
GAGCAATTGC AGAAGTTAAC GGAGCAAGTG GCGACCCGCT GGAGCGAACT GGTCAGCGAC
AAAGCCTCGC TGATGGATGA ACTGGTGCAG GGCATTAAGC GTGCCAGACA GCGACAGCAG
GCGCAGGAAC AGGCGAATCA GACGGCGAAA CCGACGCCGA CGGCCAGCGG CGGTGGAGCA
ACGGACGGGA GTGAAACCAG CGCCAGCGTG GCTTCGACGC CAGTCAGTTC GGTAGAAATT
AATTCATCCG ACGAGCGCGG CTGGCGGCAA ACCCAGCTGA ACGTCGCGGC GCTGCTGGTT
GAGCGCCATC CCGGCTCACC GATTGGCTAC CGTCTGCGCC GTCACGCTAT CTGGTCCGGT
ATTGCCACAC CGCCGATGTC ATCCAAGGGA AATAAAACCC AACTGGCGCC CGTCTCGGCG
GATCGCGTGG ATGAATACCA AAGTGCGCTG GCACAGGCTG ACTTGGCGCT GTGGGAACGG
ATAGAACAAA GCCTAGTGCT GGCACCTTAC TGGTTTGATG GCCATATGCT GTCCGCTTCA
GTGGCCTCGC GATTGGGACA TACCTCTGTC GCGACGGCAA TTGCCGAGGA GCTTTCGGCG
TTTATTCAGC GTTTGCCTGA GCTGCGTGAA CTGGCGTTCA GCGATGGCGC ACCCTTTTTG
ACCGGGAAGT GTAGCCAGTG GCTACAGTCC AGCCAGCCCG TTCGCGGTGG TGGCGGAGCA
CGGCAGGACG ATCTGGCAAC GGAGGCGGCC GCTTGTCGGG ATGAGAAAGG AATTGGCGCG
GCGATGCAGT TATTGGATGA ACGTATGCGC CGCCTGAAAG AACCGCGTGA CCGCTTTTAT
GCCGAGTTGG TACTGGCAGA TTTACTCGCC GAAGAAGGGA TGAAGTCACT GGCAGCACAG
CACTATCAGC ACATGTGGCA GGAAAGCCAA CAATTGGGCC TGATGCAATG GGAACCGGGA
ATGGTCAGCC GCGTAGAGCG GTTGGCGTCA TCCCGCAAAA AATAA
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| Protein sequence | MHAHPWCKRL QTSLPDEMLR AAVLPDDPLW EKVETELVKL GSLAHNQVDL NVVAGYCLTL
LESKTKDMRV LVQLLRCLQH PAKATPFSTA LMLLDSWLES YWAIAWPASP VQKQKLMIQI
IRRFESVLPR IAESGSSAEL EQLQKLTEQV ATRWSELVSD KASLMDELVQ GIKRARQRQQ
AQEQANQTAK PTPTASGGGA TDGSETSASV ASTPVSSVEI NSSDERGWRQ TQLNVAALLV
ERHPGSPIGY RLRRHAIWSG IATPPMSSKG NKTQLAPVSA DRVDEYQSAL AQADLALWER
IEQSLVLAPY WFDGHMLSAS VASRLGHTSV ATAIAEELSA FIQRLPELRE LAFSDGAPFL
TGKCSQWLQS SQPVRGGGGA RQDDLATEAA ACRDEKGIGA AMQLLDERMR RLKEPRDRFY
AELVLADLLA EEGMKSLAAQ HYQHMWQESQ QLGLMQWEPG MVSRVERLAS SRKK
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