| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3170 |
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| Symbol | |
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| ID | 8134137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3585617 |
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| End bp | 3586636 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866465 |
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| Product | phage portal protein, PBSX family |
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| Protein accession | YP_003018729 |
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| Protein GI | 253689539 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC GTAAATATCG CAAGTCACAA ACGGCAGCCG TCAGCCAGGC ACCGTCGATA
GAAGCATTCA CTTTCGGTGA ACCGTCCGCC GTTCTGGATC GCCGTGACAT TCTGGACTAT
GCCGAGTGTA TCCATAATGG CCGATGGATT GAGCCACCGA TCAGCTTTAG CGGTCTGGCT
AAAAGCCTAC GCGCTGCCGT GCATCACAGC TCACCGATTT ACGTGAAACG TAACATTCTG
GTAAGCACGT TTATCCCGCA CCCGCTATTA AGTCAGCAGG ATTTTAGCCG CTTTGTACTG
GATTATCTGG TGTTTGGGAA TGCGTTTCTG GAAAAGCGCC TGAACCGCAC AGGCGGCATC
CTGCGCTTAG ATTCCAGCCC AGCCAAATAC ACCCGGCGCG GAGTAGAAGA GAATGTGTAC
TGGTTCGTGC AGTCATTCAA AGAGCCGCAC CGCTTTGAAC CGGGGAGCGT GTTTCACCTG
CTGGAGCCGG ATATCAATCA GGAAATGTAC GGCCTGCCGG AATATATCAG CTCGTTGAAC
TCGGCATGGC TGAATGAATC CGCGACGTTG TTCCGGCGCA AGTATTACCA GAACGGCGCA
CACGCGGGTT ACATCATGTA TGTGACCGAT GCGGCACAAA GCGGCACCGA CGTAGACAAG
TTACGCGCCG CGATGAGTAA TACAAAGGGG CTGGGGAATT TTAAGAACCT GTTTTTCTAC
GCCCCCAACG GCAAGCCGGA CGGCATCAAG ATTGTGCCGC TCAGCGAGGT GGCAACTAAA
GATGACTTCT TTAACATTAA GAACGCCAGC CGTGACGACT TGCTCAGCGC ACACCGCGTA
CCACCTCAGA TGATGGGGAT TATCCCAAAT AATACGGGGG GATTTGGGGA TGTTGAAAAG
GCAAGTCAAG TGTTTGTCAG GAACGAGCTG ACGCCGCTAC AGGAACGGAT GAAAGAGATT
AATGATGTGG TGGGGATGGA AGTGATTGCG TTTAAGCCCT ACAAACTAAC AGAAGATTAA
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| Protein sequence | MKKRKYRKSQ TAAVSQAPSI EAFTFGEPSA VLDRRDILDY AECIHNGRWI EPPISFSGLA
KSLRAAVHHS SPIYVKRNIL VSTFIPHPLL SQQDFSRFVL DYLVFGNAFL EKRLNRTGGI
LRLDSSPAKY TRRGVEENVY WFVQSFKEPH RFEPGSVFHL LEPDINQEMY GLPEYISSLN
SAWLNESATL FRRKYYQNGA HAGYIMYVTD AAQSGTDVDK LRAAMSNTKG LGNFKNLFFY
APNGKPDGIK IVPLSEVATK DDFFNIKNAS RDDLLSAHRV PPQMMGIIPN NTGGFGDVEK
ASQVFVRNEL TPLQERMKEI NDVVGMEVIA FKPYKLTED
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