Gene PC1_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3152 
Symbol 
ID8134119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3573374 
End bp3574432 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content48% 
IMG OID644866447 
Productintegrase family protein 
Protein accessionYP_003018711 
Protein GI253689521 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTAA GAAAATTACC TAACGGGAAA TGGCTGTGTG AGTGCTATCC AAATGGGCGA 
GACTCTCGGC GCATAAGAAA GACGTTTAAC ACAAAAGGTG AAGCTGAATC TTTTGAAACC
TACACCATGC GTGAGGTTGA AGACAAACCG TGGCTGGGTG AGAAAGAGGA TCGCCGTAAC
CTGAGTGAAC TTATTGAGCT TTGGAATAAT TTACATGGGC AGGCACTCAG CGCCAGCAAA
TCACGGATGG GTAAACTGCG TATCATCTGT AACGGGTTGG GTGACCCGGT GGCTTCTAAG
CTGACAGCGA AAGACTGGGC GCATTATCGA GATAAGCGCC TACGTGGAGA AATTGATAAC
GGCTACCATT CTGACCCCAA AATGTGGATA GCGAAGCCGA TCACAGTGAA CCGAGAACAC
CAATACCTTT ATGCCATGTT CAATGAACTG AAAAGGCTAG GGGAGTGGAC GTTACCTAAC
CCGTTAGAAG GAATGCGCAT CTTTAAAGAA GCTGATCGCG AAATGTCGTG GCTGACGACC
TCCCAAATCC AACAATTGCT GGATGCCTGT GAACGCTACG GAAAAATTTA CCTTACGCGG
ATTGTTAAAG TGTGTCTGGC GACAGGGGCA AGATGGAGTG AAGCAGAAGG GCTAACCCGT
TCTCAGCTAT CCCCTTACAA GTTGACGTTC TTCAAAACCA AAGGCAAGAA AAACCGGACG
GTGCCGATCC CGCGTTGGCT TCATGATGAG TTATCAGAAT TACAAGGGAA GATGTTCCAG
CCGTGCTATC AGGATTTTGT AAAGATGCTG GCCTTAACAA ACATCGAGCT TATTGAAGGG
CAAAACACCC ACGTTTTACG GCACACTTTT GCGTCACATT TTATGATGAA CGGCGGGAAC
ATTTTGGTGC TCCAGCGCAT TCTGGGGCAT GCCAATATTC GCGAAACGAT GCGGTATGCA
CACTTTGCCC CTGACCATCT GGAAGAAGCC GCCCACCTTA ACCCCTTAGC TGGTTACAAT
GGCGGCAAAG TGGCGGCAGA GAATAATAAA GGCTACTAA
 
Protein sequence
MSVRKLPNGK WLCECYPNGR DSRRIRKTFN TKGEAESFET YTMREVEDKP WLGEKEDRRN 
LSELIELWNN LHGQALSASK SRMGKLRIIC NGLGDPVASK LTAKDWAHYR DKRLRGEIDN
GYHSDPKMWI AKPITVNREH QYLYAMFNEL KRLGEWTLPN PLEGMRIFKE ADREMSWLTT
SQIQQLLDAC ERYGKIYLTR IVKVCLATGA RWSEAEGLTR SQLSPYKLTF FKTKGKKNRT
VPIPRWLHDE LSELQGKMFQ PCYQDFVKML ALTNIELIEG QNTHVLRHTF ASHFMMNGGN
ILVLQRILGH ANIRETMRYA HFAPDHLEEA AHLNPLAGYN GGKVAAENNK GY