Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3152 |
Symbol | |
ID | 8134119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3573374 |
End bp | 3574432 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644866447 |
Product | integrase family protein |
Protein accession | YP_003018711 |
Protein GI | 253689521 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTAA GAAAATTACC TAACGGGAAA TGGCTGTGTG AGTGCTATCC AAATGGGCGA GACTCTCGGC GCATAAGAAA GACGTTTAAC ACAAAAGGTG AAGCTGAATC TTTTGAAACC TACACCATGC GTGAGGTTGA AGACAAACCG TGGCTGGGTG AGAAAGAGGA TCGCCGTAAC CTGAGTGAAC TTATTGAGCT TTGGAATAAT TTACATGGGC AGGCACTCAG CGCCAGCAAA TCACGGATGG GTAAACTGCG TATCATCTGT AACGGGTTGG GTGACCCGGT GGCTTCTAAG CTGACAGCGA AAGACTGGGC GCATTATCGA GATAAGCGCC TACGTGGAGA AATTGATAAC GGCTACCATT CTGACCCCAA AATGTGGATA GCGAAGCCGA TCACAGTGAA CCGAGAACAC CAATACCTTT ATGCCATGTT CAATGAACTG AAAAGGCTAG GGGAGTGGAC GTTACCTAAC CCGTTAGAAG GAATGCGCAT CTTTAAAGAA GCTGATCGCG AAATGTCGTG GCTGACGACC TCCCAAATCC AACAATTGCT GGATGCCTGT GAACGCTACG GAAAAATTTA CCTTACGCGG ATTGTTAAAG TGTGTCTGGC GACAGGGGCA AGATGGAGTG AAGCAGAAGG GCTAACCCGT TCTCAGCTAT CCCCTTACAA GTTGACGTTC TTCAAAACCA AAGGCAAGAA AAACCGGACG GTGCCGATCC CGCGTTGGCT TCATGATGAG TTATCAGAAT TACAAGGGAA GATGTTCCAG CCGTGCTATC AGGATTTTGT AAAGATGCTG GCCTTAACAA ACATCGAGCT TATTGAAGGG CAAAACACCC ACGTTTTACG GCACACTTTT GCGTCACATT TTATGATGAA CGGCGGGAAC ATTTTGGTGC TCCAGCGCAT TCTGGGGCAT GCCAATATTC GCGAAACGAT GCGGTATGCA CACTTTGCCC CTGACCATCT GGAAGAAGCC GCCCACCTTA ACCCCTTAGC TGGTTACAAT GGCGGCAAAG TGGCGGCAGA GAATAATAAA GGCTACTAA
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Protein sequence | MSVRKLPNGK WLCECYPNGR DSRRIRKTFN TKGEAESFET YTMREVEDKP WLGEKEDRRN LSELIELWNN LHGQALSASK SRMGKLRIIC NGLGDPVASK LTAKDWAHYR DKRLRGEIDN GYHSDPKMWI AKPITVNREH QYLYAMFNEL KRLGEWTLPN PLEGMRIFKE ADREMSWLTT SQIQQLLDAC ERYGKIYLTR IVKVCLATGA RWSEAEGLTR SQLSPYKLTF FKTKGKKNRT VPIPRWLHDE LSELQGKMFQ PCYQDFVKML ALTNIELIEG QNTHVLRHTF ASHFMMNGGN ILVLQRILGH ANIRETMRYA HFAPDHLEEA AHLNPLAGYN GGKVAAENNK GY
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