Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3140 |
Symbol | |
ID | 8134102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3553929 |
End bp | 3554717 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644866430 |
Product | hypothetical protein |
Protein accession | YP_003018699 |
Protein GI | 253689509 |
COG category | [S] Function unknown |
COG ID | [COG3021] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.191577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGAAAA AAACCTATGC TATGAGGTAT GTTGCCGGCC AACCAGCTGA GCGTATCTTT CCTCCTGGGG AAATGCATTA TCCAGGGCAA TCGCTACCGA CAGGCTCATT GTTGCTTGAG GGAGATGTTT TACGTGTAAT GGTGTGGAAC ATTTTTAAGC AACAACGAAT GAACTGGCTT TCTGTTTTAC AGAATTTCGG CAAAGGTACT CAGCTAGTCC TGTTGCAGGA GGCGCAAAGT ACGCCAGACC TTATCCGTTT TGCAACCACT AACTATCTCT CTGCCGATCA GGTGCCCGCC ATTATTCTTC CACAACATCC GTCTGGTGTG ATGACGCTAT CGGCCGCTCA GCCAGTGTAT TGCTGTCCTC TGCGCGAGAG GGAGCCTTTG CTGCGTTTAG CCAAATCCTC TCTGGTGACG GTCTATGCAC TTCAGAATGG GCAGAGACTG ATGGTCATCA ATATCCATGC CGTTAACTTT AGCTTTGGTG TTGAAGTGTA CACGAAGCAG TTGGCTGCAA TTGGGGAACA GCTCCTGCAT CATCAGGGGC CGGCGATTAT GGCTGGGGAT TTCAATGCAT GGAGTCAGCA ACGTATCAAC GCACTTAATC GTTTTGCGAC AAGGATGGGG CTGCAAGAGG TATCTTTCGT TGATGATCAG CGACGCAAGG CCTTTGGGCG GCCGCTAGAT TTCGTTTTTT ATCGTGAACT GACCGTAAAT CAGTCCTCTG TATTGGTGAC CCAGGCTTCA GATCATAACC CACTGCTCGT CGAGTTTAGT CTGGTTTAA
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Protein sequence | MRKKTYAMRY VAGQPAERIF PPGEMHYPGQ SLPTGSLLLE GDVLRVMVWN IFKQQRMNWL SVLQNFGKGT QLVLLQEAQS TPDLIRFATT NYLSADQVPA IILPQHPSGV MTLSAAQPVY CCPLREREPL LRLAKSSLVT VYALQNGQRL MVINIHAVNF SFGVEVYTKQ LAAIGEQLLH HQGPAIMAGD FNAWSQQRIN ALNRFATRMG LQEVSFVDDQ RRKAFGRPLD FVFYRELTVN QSSVLVTQAS DHNPLLVEFS LV
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