Gene PC1_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3140 
Symbol 
ID8134102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3553929 
End bp3554717 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content49% 
IMG OID644866430 
Producthypothetical protein 
Protein accessionYP_003018699 
Protein GI253689509 
COG category[S] Function unknown 
COG ID[COG3021] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.191577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGAAAA AAACCTATGC TATGAGGTAT GTTGCCGGCC AACCAGCTGA GCGTATCTTT 
CCTCCTGGGG AAATGCATTA TCCAGGGCAA TCGCTACCGA CAGGCTCATT GTTGCTTGAG
GGAGATGTTT TACGTGTAAT GGTGTGGAAC ATTTTTAAGC AACAACGAAT GAACTGGCTT
TCTGTTTTAC AGAATTTCGG CAAAGGTACT CAGCTAGTCC TGTTGCAGGA GGCGCAAAGT
ACGCCAGACC TTATCCGTTT TGCAACCACT AACTATCTCT CTGCCGATCA GGTGCCCGCC
ATTATTCTTC CACAACATCC GTCTGGTGTG ATGACGCTAT CGGCCGCTCA GCCAGTGTAT
TGCTGTCCTC TGCGCGAGAG GGAGCCTTTG CTGCGTTTAG CCAAATCCTC TCTGGTGACG
GTCTATGCAC TTCAGAATGG GCAGAGACTG ATGGTCATCA ATATCCATGC CGTTAACTTT
AGCTTTGGTG TTGAAGTGTA CACGAAGCAG TTGGCTGCAA TTGGGGAACA GCTCCTGCAT
CATCAGGGGC CGGCGATTAT GGCTGGGGAT TTCAATGCAT GGAGTCAGCA ACGTATCAAC
GCACTTAATC GTTTTGCGAC AAGGATGGGG CTGCAAGAGG TATCTTTCGT TGATGATCAG
CGACGCAAGG CCTTTGGGCG GCCGCTAGAT TTCGTTTTTT ATCGTGAACT GACCGTAAAT
CAGTCCTCTG TATTGGTGAC CCAGGCTTCA GATCATAACC CACTGCTCGT CGAGTTTAGT
CTGGTTTAA
 
Protein sequence
MRKKTYAMRY VAGQPAERIF PPGEMHYPGQ SLPTGSLLLE GDVLRVMVWN IFKQQRMNWL 
SVLQNFGKGT QLVLLQEAQS TPDLIRFATT NYLSADQVPA IILPQHPSGV MTLSAAQPVY
CCPLREREPL LRLAKSSLVT VYALQNGQRL MVINIHAVNF SFGVEVYTKQ LAAIGEQLLH
HQGPAIMAGD FNAWSQQRIN ALNRFATRMG LQEVSFVDDQ RRKAFGRPLD FVFYRELTVN
QSSVLVTQAS DHNPLLVEFS LV