| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3023 |
|---|
| Symbol | |
|---|
| ID | 8133978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3409335 |
|---|
| End bp | 3410129 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644866306 |
|---|
| Product | enhanced serine sensitivity protein SseB |
|---|
| Protein accession | YP_003018582 |
|---|
| Protein GI | 253689392 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTTT CGCCACGTAA TAAACTGGAA GAAGTGTTGA TTCTGGCCGC AACGGAACCC
GCACATCGTC CTGAATTTTT CAGTGAACTG ATGGAAGCCA CGGTGTTTGT GCTGGGTACT
ACTGATGACG GAGATGAATC CGGTGAAGTA GTGTTGCATG CGGGCAGTAA TGTGAACATC
CAACACTGGG AAAAAGACGA CGGCTCATCC GCGATTCCTT TCTTCTCTTC TCTGGAAGCA
TTACAGAGCG TGATTACGGA AGAGGCCTCT TTTCTGGCAC TGCCGACGCG TTCGCTGTTT
GAAATGACAC AGGGCGTCAC GCTGTTCCTC AATCCTAAAC TGCCGTACGG CAAAGAGTTT
TTGCCGCAGG AAATTGAACA TATTCTGTCT GGCGAAGGTA GCGGTTTTGT TCAGCAGCGC
GTTGTTGAAG AAGATATGCA GGTGATGCTG AGTCAGCCTG CCGAGATGCC AGCACAGATG
ATTGATTCCC TGACGCAGCT GTTTACCAAG CATCGTCATG TAAAACGGGC GTTTCTGGCG
CAGATTCAGG AACCGGGTGA AGAGCAGCCG CATCTGCTGA TTGGCATTGA TGCCGATCAG
GATGAGGAAA CCATCATTCG TGAAGCGGGC AGCGTCGCCA GTGATACCTT ACCGGACGAG
CGCCCTGTCG ATCTGTGTCT GGTGAAGGAG GGCGAACCGG GGATCAGCCA CTACATGATT
AAACACACTA CGCCGTTCTA CGAGCGCAAG TGGGGGAGTT TCCTGAGGGA GTTTAAGGCC
ACCGGCAACG CCTGA
|
|---|
| Protein sequence | MEFSPRNKLE EVLILAATEP AHRPEFFSEL MEATVFVLGT TDDGDESGEV VLHAGSNVNI
QHWEKDDGSS AIPFFSSLEA LQSVITEEAS FLALPTRSLF EMTQGVTLFL NPKLPYGKEF
LPQEIEHILS GEGSGFVQQR VVEEDMQVML SQPAEMPAQM IDSLTQLFTK HRHVKRAFLA
QIQEPGEEQP HLLIGIDADQ DEETIIREAG SVASDTLPDE RPVDLCLVKE GEPGISHYMI
KHTTPFYERK WGSFLREFKA TGNA
|
|---|
| |