Gene PC1_2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2895 
Symbol 
ID8133850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3270940 
End bp3271836 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content32% 
IMG OID644866179 
ProductHPr kinase 
Protein accessionYP_003018455 
Protein GI253689265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.108792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAAC ACAAGTTTTT TATCAAGTTA GATTTGCATT GTGATGTCAA AATTATTTGT 
ATTGAAAGCA ATGATAATGA ATTTTTGTTT TTTTTGAAGT TGTTATTCTA TACTCATTTA 
TGTAACGTGG AAGATGAAGT TAATATAGAC GTTACAGTTT CTGCTGAGTT TGGATTACCA 
TTAATGGATT TTACGGAATT AAGTAAGTCC TTTAATTCGG TACGTTGTGG TTTATTAGCA 
AATTCTTCAT GTGATTCAAC TCAGCTTCAA CTGTTTGGGC TATTTAAATC GAAGGCCTTA 
TATAAGGCTG CGTTTAGAGA GATACGTGAC CATCTTGATA CATTCATTAT AAATAATGAC 
GTCATGACCT TGCACGCTTC TTGTGTTAGC GATAGCCGTG GTGCGATATG TATCATTGGT 
GATAAGTTTG CAGGTAAAAC AACTCTTATG CTTAAGTTGC TCTCGCTTAA TTATAACTTT 
ATATCAAATG ATAAACCATA TATATATAAG TCAGAAGGTA AGTTTTATGT CTTTTCTTTA 
CCTGTAAGTG CTGGTATTCG CTACGGAAGT TTAGATATAT CCCCTTATTT AAAAGATAGT 
ATACAAAATC TTTCTTCCTC TGATGAAGTT GAGTTTTCCA CACAAGGTAG AGTTCATTTG 
TCACCAAAAA TAATCTGCGA TATTTTTAAC ACAAGTTACT GCAATCACGC TGCTATCAGA 
AAGTTTATTT ATCTGGAAAC GAATTATAAA AATGATAAAT CTCTTCTTTT TTCTAGTGAA 
AAACTCGATG AAAATATTCT AAGTTGTAAA GACCTAACTC TGCGTGATTC CTTTCTTGAT 
GCAGAGATCA AGATCTGCTC ATCATATGAA GAAGCTTTAT CAGAAGCAAT TTGTTAA
 
Protein sequence
MSQHKFFIKL DLHCDVKIIC IESNDNEFLF FLKLLFYTHL CNVEDEVNID VTVSAEFGLP 
LMDFTELSKS FNSVRCGLLA NSSCDSTQLQ LFGLFKSKAL YKAAFREIRD HLDTFIINND 
VMTLHASCVS DSRGAICIIG DKFAGKTTLM LKLLSLNYNF ISNDKPYIYK SEGKFYVFSL 
PVSAGIRYGS LDISPYLKDS IQNLSSSDEV EFSTQGRVHL SPKIICDIFN TSYCNHAAIR 
KFIYLETNYK NDKSLLFSSE KLDENILSCK DLTLRDSFLD AEIKICSSYE EALSEAIC