Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2888 |
Symbol | |
ID | 8133843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3265965 |
End bp | 3266438 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644866174 |
Product | DNA repair protein RadC |
Protein accession | YP_003018450 |
Protein GI | 253689260 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATGTA ATTCATTGGC AGGCCGCGTT GCGTCCAGAG AGCAGCGCAT CATCCAGATG GCGCTGTGCC TGCTGGAAAA GCGCGTGCGT AAAAATGCGC GACAGTTCAA AACCTCTGAG GACACTAAAA GCTGGTTAAT GCTGGAGCTC AGCAACCTGG AGCGTGAAGT CTTTATGGTG CTGTATCTGG ATAACCAACA CCGCCTGATA GAAAAAGAAG TTATCGCGCT GGGTGGTATC AACAGTACTG AAGTGCATCC GCGTGAAATC CTCAAAGCCT CACTACGTCA TAACGCCGCC GCCGTGATAC TGGCACACAA TCATCCTTCC GGCTGGGCAG AACCCAGTCA GGCCGATCGC AACATTACTG ACAGGCTGAA GGATTCGCTG TCGCAACTTG ATGTCAAAGT GCTCGACCAT CTGGTGGTCG GCAGCACTGA GGTGGTGTCA TTCGCTGAAC GTGGCTGGCT GTGA
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Protein sequence | MSCNSLAGRV ASREQRIIQM ALCLLEKRVR KNARQFKTSE DTKSWLMLEL SNLEREVFMV LYLDNQHRLI EKEVIALGGI NSTEVHPREI LKASLRHNAA AVILAHNHPS GWAEPSQADR NITDRLKDSL SQLDVKVLDH LVVGSTEVVS FAERGWL
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