Gene PC1_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2888 
Symbol 
ID8133843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3265965 
End bp3266438 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content53% 
IMG OID644866174 
ProductDNA repair protein RadC 
Protein accessionYP_003018450 
Protein GI253689260 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATGTA ATTCATTGGC AGGCCGCGTT GCGTCCAGAG AGCAGCGCAT CATCCAGATG 
GCGCTGTGCC TGCTGGAAAA GCGCGTGCGT AAAAATGCGC GACAGTTCAA AACCTCTGAG
GACACTAAAA GCTGGTTAAT GCTGGAGCTC AGCAACCTGG AGCGTGAAGT CTTTATGGTG
CTGTATCTGG ATAACCAACA CCGCCTGATA GAAAAAGAAG TTATCGCGCT GGGTGGTATC
AACAGTACTG AAGTGCATCC GCGTGAAATC CTCAAAGCCT CACTACGTCA TAACGCCGCC
GCCGTGATAC TGGCACACAA TCATCCTTCC GGCTGGGCAG AACCCAGTCA GGCCGATCGC
AACATTACTG ACAGGCTGAA GGATTCGCTG TCGCAACTTG ATGTCAAAGT GCTCGACCAT
CTGGTGGTCG GCAGCACTGA GGTGGTGTCA TTCGCTGAAC GTGGCTGGCT GTGA
 
Protein sequence
MSCNSLAGRV ASREQRIIQM ALCLLEKRVR KNARQFKTSE DTKSWLMLEL SNLEREVFMV 
LYLDNQHRLI EKEVIALGGI NSTEVHPREI LKASLRHNAA AVILAHNHPS GWAEPSQADR
NITDRLKDSL SQLDVKVLDH LVVGSTEVVS FAERGWL