Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2878 |
Symbol | |
ID | 8133833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3258851 |
End bp | 3259057 |
Gene Length | 207 bp |
Protein Length | 68 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644866165 |
Product | phage transcriptional regulator, AlpA |
Protein accession | YP_003018441 |
Protein GI | 253689251 |
COG category | [K] Transcription |
COG ID | [COG3311] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.891339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTTC AACCTTCCCT ACTCGAAGAC CAGTTTGTCG ATATGGCATT CATCACCAAA CTGACAGGGC TCACCGACAA ATGGTTTTAT AAGCTGATCA AAGATGGCCT GTTTCCCAAA CCCATTAAGC TAGGGCGTAG CTCCCGTTGG CTGCAAAGTG AAGTGGCAAC CTGGTTACAG CAGCGTATCG AAGAATCCCG TAAATAG
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Protein sequence | MTVQPSLLED QFVDMAFITK LTGLTDKWFY KLIKDGLFPK PIKLGRSSRW LQSEVATWLQ QRIEESRK
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