| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2868 |
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| Symbol | |
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| ID | 8133822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3243814 |
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| End bp | 3244674 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644866156 |
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| Product | aminotransferase class IV |
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| Protein accession | YP_003018433 |
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| Protein GI | 253689243 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0480243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGTC TTGTTTATGT TGATGGACAG TATCTGGAAG AAAATGAAGC AAAAATTTCT
GTATTTGACC GTGGCTTTCT GTTTGCTGAT GCCGTTTATG AAGTGACTGC GGTCATCGAT
GGCAAGCTGG TTGATTTCCC CGATCATATC ACTCGCCTGC AACGCTCCTG CCGCGAGCTA
TCGCTCACGT TGCCCGTCAC TCCTGAGGCA CTCAAAGATA TTCACGATGA GCTGCTCAGT
AAAAACGATC TGAAAGAAGG CGCGATCTAC TTACAGCTTA GCCGAGGCAA TGCTGGCGAT
CGCGATTTCT ACTTCCCTTC TGCTGACGTC AAATCCACGC TGGTTCTATT CACTCAGGCG
CGTTCGCTGG TCGGCAACCC GAAGGCCACA ACAGGCCTGC ACGTTGTCAC CACCGAGGAT
ATTCGCTGGC ATCGTCGGGA TATCAAAACC GTCAGCCTGC TGGCTGCCAG CCTGGCAAAA
GAGTACGCCC ATGCGAATCA GGCCGATGAC GCCTTCTTTG TCGAAGAAGG TTTCATTACC
GAAGGCAGTT CCTGCAACTG CTACATCGTC CTGCATGACG ACACGGTTGT GACCCGTCCA
CTCAGCAACG ATATTCTGCA CGGCATTACG CGTCAGTCGC TACTTAAGCT GGCAGAAAAG
GAAGGGATTA CGCTGGAAGA ACGGTGTTTT ACGCCGGAAG AGGCCTATCA CGCCAAAGAA
ATTTTTGTCA GTTCAGCTAC CATGCTCGTC CTTCCTGTCG TGATGCTGGA TGGAAAAACA
ATTGGTGACG GCAAGCCTGG AAAAATTACC CAGCAGTTAC GTGAAATCTA TCTCGATATG
ATTAAACAGC AGGGAAAATA G
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| Protein sequence | MQRLVYVDGQ YLEENEAKIS VFDRGFLFAD AVYEVTAVID GKLVDFPDHI TRLQRSCREL
SLTLPVTPEA LKDIHDELLS KNDLKEGAIY LQLSRGNAGD RDFYFPSADV KSTLVLFTQA
RSLVGNPKAT TGLHVVTTED IRWHRRDIKT VSLLAASLAK EYAHANQADD AFFVEEGFIT
EGSSCNCYIV LHDDTVVTRP LSNDILHGIT RQSLLKLAEK EGITLEERCF TPEEAYHAKE
IFVSSATMLV LPVVMLDGKT IGDGKPGKIT QQLREIYLDM IKQQGK
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