| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2861 |
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| Symbol | |
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| ID | 8133815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3234998 |
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| End bp | 3235861 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866149 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_003018426 |
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| Protein GI | 253689236 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGAT TGCAAGCTTT CAAAGAACCG TCTTTTAATT CGTTGGTTGC GACTTTTCGG
TCACTGCCCG CGCCGCTGAT CCGACGTATC GTGTTGGGGC TGATTTTACT GCTGATTTGC
CAGCAGTTGG CCGTCTTGAC CTGGCGCTTT CTCCTCCCTG AAGATTCACG CATTGTTGGC
GTGTCGGTGA CGCCTGCTCA GGCGAAAGAA AAACCCGTGA CGCCCGGCGA CTTTACCCTG
TTTGGCCATG CTCCTGATGC GGATGCCGCT GCGGCTAACG ATGCCGCGCT ATCTGGTGAT
ATTCCGCTGA CATCGTTAAA TATCAGTCTG ACAGGGGTTC TGGCGAGTGA AGATGCTAAG
CGTTCGATTG CCATCATCGC TAAAGATAGT CAGCAATACA GCCGCAACGT CGGCGATGCC
ATTCCGGGCT ATGAAGCCAA AATTGTGACT ATCTCTGCCG ATCGTGTTGT GATCCAGTAT
CAGGGGCGCT ATGAAGCGCT GCATTTGTAT CAGGAAGAAA ACACCGCCGA TGCACCGCCG
TCTTCTGGCG CATTTAGTCA GGTGAAAGAG GAAATACAAA AAAATCCCCT CTCGGCACAG
GATTACCTCA CCATTTCTCC CGTCACGGAA GAAGAAGTAC TGAAAGGATA TCAGTTAAAC
CCCGGCAAAA ATCCCGATCT TTTCTACCGC GCAGGCTTGC AGGACAACGA TCTCGCAGTG
TCATTAAACG GCATGGATTT ACGCGATGCG GGTCAGGCAC AGCAGGCGAT GGCGCAACTG
GCAGGGATGA GCAAATTTAA TTTGACCGTT GAGCGTGATG GTCAACAGCA GGATATATAT
CTGGCATTGG ATGGAGACCA CTAA
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| Protein sequence | MARLQAFKEP SFNSLVATFR SLPAPLIRRI VLGLILLLIC QQLAVLTWRF LLPEDSRIVG
VSVTPAQAKE KPVTPGDFTL FGHAPDADAA AANDAALSGD IPLTSLNISL TGVLASEDAK
RSIAIIAKDS QQYSRNVGDA IPGYEAKIVT ISADRVVIQY QGRYEALHLY QEENTADAPP
SSGAFSQVKE EIQKNPLSAQ DYLTISPVTE EEVLKGYQLN PGKNPDLFYR AGLQDNDLAV
SLNGMDLRDA GQAQQAMAQL AGMSKFNLTV ERDGQQQDIY LALDGDH
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