| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2856 |
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| Symbol | |
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| ID | 8133810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3229064 |
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| End bp | 3229630 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866144 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_003018421 |
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| Protein GI | 253689231 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGGT CAACGAGGAA ACAACAGGGG TTTACCCTGC TGGAAATGAT GCTGGTCGTG
TTACTGGCGG GCATTGCAGC TAGCATGGTG GTCATGGCGT TTCCTCGCGA ACGCCAGAAC
GACAGCGCGT GGCAGTTGGC TCGCTTTCAG GCGCAGTTAG AGTTTGCCGC TGAAAGCAGT
CAGGTTAACG AATACATGCT GGGTGTTCGC ATCTATCCCG ACCGCTGGCA GTTTTATCAA
CTTCAGCGAC CCGCTGCATC GGAAGGGACA CCGATCCCGA GCGGCGATCG CTGGCAGGGC
TACAAGTGGC AGCCGTGGCA ACCGCATCGG GTGAGCGCCT CGGCGACGCT GCCTGAGGCA
TTACGGCTTG AGCTCTTGCA GGCCGATGGG AAAAAAGTGG ATAAAACGCA GAGTGGCGAC
GATCCCGATA TCCTGATTTT GCCCGGCGGT GAAATCACGC CTTTCCGTCT GCTCGTTAAG
TCTAAAGACA AAGCGCTCTC GAATTGGCTT CAGGTCGATA GCAACGGAAA ATTTGTGACG
TCGATGAGTC AAGGTAAGAA ACGATGA
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| Protein sequence | MKRSTRKQQG FTLLEMMLVV LLAGIAASMV VMAFPRERQN DSAWQLARFQ AQLEFAAESS
QVNEYMLGVR IYPDRWQFYQ LQRPAASEGT PIPSGDRWQG YKWQPWQPHR VSASATLPEA
LRLELLQADG KKVDKTQSGD DPDILILPGG EITPFRLLVK SKDKALSNWL QVDSNGKFVT
SMSQGKKR
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