| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2852 |
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| Symbol | |
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| ID | 8133806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3225795 |
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| End bp | 3227072 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866140 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_003018417 |
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| Protein GI | 253689227 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAG CGGGAAAATG GAAGCAAAAA GCCGCGAAAA CCCCATTAAA TCGAGGTCCG
GTTGTTCGTC ATCCGTGCCT CATTGTGCGT CTTCCGGTAG AGGAACAGGG CGAGATTGAA
TGGCAGGTTC GTTCACCCAA TGGGGAAAAC TTACTGAGCC AAGGGCGTGG TAACGTCGAG
CAGGTTCGTC AGGCGCTGGC GGCGTATCCG TCTGTGGCAT TTACCCGCGT TCTGGTTCCG
GCAACGGACG TGACGTTTTA TGCTCTGACG CTCCCCCGGC AGGCCCGGCG TCAGCTAACG
CAAGTTGTGC CGTTTATGCT GGAAGATCAG CTGGCGACAG AAATCGAAAA GCTGCATTTT
GCTGTGCTGG AAATTCATGG CGATGATGGC ACGGTTGCCG TGGTGGAAAA AAACCGAATG
CAGCGTTGGC TGGCGCAGTG TGATGCGTTG GGGCTCAGCG TCAATACCTT ATTGCCCGAT
GCCCGCGTAT TGCCGAAACA TCAGGATGGC TGGAGTGCGT TGCAACATGA TGACATGTGG
CTATTTCGTC AGCCGACGGG CCATGCTATG GCGGCAGAGT CCTCCTGGTG CGGCGACCTG
CTGAAAGCGT CTATGCCGCT GCCGGCGATA TACAGCTACA GTGCTGCATC GGTCGGCGGT
GAGCTGTCAC AGTACGAATG GCAGGAGGAG GGCGAGTGGA AGGCTCAGCC CGCAACGGAT
CTCTTCACGC TGGCTGCAAC GGCGCAGCTA CCTGCCTCGG TCGATCTGCG GCAAGGCGAT
TACGCGCCAG AGAAAGCCTG GCAAAACACG CTGCTGCCGT GGCGCGGCGT GGGAATCGCT
TTTGCCTGTT ATCTTTTGCT GGTCGTAGCG GATGCCAGCT GGGCGCACTA TCAGCTTTAT
CAGCAGGCTG AGCATTGGCG ACAGGAAAGC GTGCGCGTCT ATCGGCAGAT TTTCCCTTCC
GAGACGAATG TCGTTAACCC ACGTGCGCAG ATGCAGCAGC ACCTGCAACG TACGGCTGCC
GGGGGCGCGG GGAAAGGGCT ACTGGAGCAA CTGAATCCCT TACAGCAATT GATGACGCAA
AATAGTGCGA TCAAAATTCA GTCGCTGTCT TACGACGGTT CCGCTGGCGA ATTCCGGCTG
GCGTTGCAGG CCACGTCGTA TCAGGAATTA GAGCAGTTTC AGCAGCAGGC TGCCGCTTAT
TATCAGGTAC AAGCGGGAGA GATGCGGCAG GAAAACGATC GGGTTGAAGG CCGCTTAACG
TTAAGGAGCC AGCAATGA
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| Protein sequence | MKLAGKWKQK AAKTPLNRGP VVRHPCLIVR LPVEEQGEIE WQVRSPNGEN LLSQGRGNVE
QVRQALAAYP SVAFTRVLVP ATDVTFYALT LPRQARRQLT QVVPFMLEDQ LATEIEKLHF
AVLEIHGDDG TVAVVEKNRM QRWLAQCDAL GLSVNTLLPD ARVLPKHQDG WSALQHDDMW
LFRQPTGHAM AAESSWCGDL LKASMPLPAI YSYSAASVGG ELSQYEWQEE GEWKAQPATD
LFTLAATAQL PASVDLRQGD YAPEKAWQNT LLPWRGVGIA FACYLLLVVA DASWAHYQLY
QQAEHWRQES VRVYRQIFPS ETNVVNPRAQ MQQHLQRTAA GGAGKGLLEQ LNPLQQLMTQ
NSAIKIQSLS YDGSAGEFRL ALQATSYQEL EQFQQQAAAY YQVQAGEMRQ ENDRVEGRLT
LRSQQ
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