| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2826 |
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| Symbol | |
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| ID | 8133779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3201570 |
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| End bp | 3202331 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866114 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_003018392 |
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| Protein GI | 253689202 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.853708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTACC GCCTGAGTGG GGTGGTGTTT GCCAGCGTGT TACTGATCGG CTGCGCCAGT
TCCGGGGATC GCGATCAAGA AGGTCGTTCC GATCCGCTTG AAGGCTTTAA CCGTACCATG
TTCAGCTTTA ACTATGACGT TCTGGATCCT TATCTGGTGC GTCCTGCGGC TGTTGCCTGG
CGCGATTATG TACCGAAGCC TGCGCGTAAT GGACTGGGGA ATTTCTTCAG CAACCTCGAA
GAGCCTGCAA CGATGGTGAA CTATTTCGTT GAAGGCAAAC CGTATAAAGC GATGATTCAC
TTTAACCGTT TCTTCCTGAA TACCTTGCTC GGGATGGGCG GTCTGATTGA CGTCGCGTCA
ATGGCGAATC CGAAACTGGC GAAAGAAGAG TCCCGCCGTT TTGGTAGCAC ATTGGGTAAT
TATGGCGTGG GTTACGGGCC TTATGTCGTG GTGCCCGGCT ACGGTAGCGT AACACCTCGC
GAAGACGGCG GTGGCGTCGT AGACACGCTG TACCCGATGC TGAGCTATCT GACGTTCTGG
ATGTCGGCGG GCAAGTGGGC TATCGAAGGG ATAGAAACGC GAGCGCAGCT GTTGGATTCC
GATGGTTTGC TGCGTAACTC TTCCGATCCT TACCTGATGA TGCGTGAGGC CTACTTCCAG
CGGCATGATT TCCTTGCCAG CGATGGGCAA ATCACCCCGC AGAAGAACCC GAATGCTGCA
GCGATTGAAG ACTCGCTCGA CGAGATCGAT TCAGCGAAAT AG
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| Protein sequence | MNYRLSGVVF ASVLLIGCAS SGDRDQEGRS DPLEGFNRTM FSFNYDVLDP YLVRPAAVAW
RDYVPKPARN GLGNFFSNLE EPATMVNYFV EGKPYKAMIH FNRFFLNTLL GMGGLIDVAS
MANPKLAKEE SRRFGSTLGN YGVGYGPYVV VPGYGSVTPR EDGGGVVDTL YPMLSYLTFW
MSAGKWAIEG IETRAQLLDS DGLLRNSSDP YLMMREAYFQ RHDFLASDGQ ITPQKNPNAA
AIEDSLDEID SAK
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