Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2820 |
Symbol | |
ID | 8133773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3192801 |
End bp | 3193811 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644866108 |
Product | Spore coat U domain protein |
Protein accession | YP_003018386 |
Protein GI | 253689196 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAATC CGATACCGAA GATTCCTTTC ACCTTTTCCG CCAACTGGCA GACTATCCGT TGGTTGCGTC TGCCCTTGCT CATGATGACA TTCTATTACG CGCCTTTTGG CTATGCCGCC TGTACCACGC CCCCCAGCAA CACCACGCTG GGGCCTTATG GTTCTTCCGT TGTCGGTGTT AACGGATCAC CACAGATCGT GGCATCGGGA AGCGGGTTTC GTTGTACGGG GAGTGTGTTG AGTTTAATCA GTCCCAATAC CATCACCGCG ACGATACAGA GTGACAGCAA CCCCAGCGGG ACCACCATGC GGCTGCGCAG AGGGACAAGC ACAGACTATG TTCCCTACAG CCTGTGTATG GATTCCGGCT GCGGTACGCT TTATAACATC AACTCGTCCT ACACCTGGAG CCGGACTACC TTTCTGGACA TATTAGGCCT GTTCAATTCC ACTGACGGCA CAATGCCGAT CTATATCCGC ACCAGTACCG GTAACAACAT TTCCGCCGGT ACCTATACCG ACACGGTGAC CATCAAATGG GATTACCGAC TGTGTGCGCT GGGTGCATTA GGCCTCTGCG TTTACGATGA GGGCTCAACG ACGTCAACCC TCAATATCAC CATGAATATC ACCAATGATT GCCAGATCAC CAACGCACCG AATATCAGTT TTGGTACTGC GGCATTTCCC GCCGATTTTG CGGATGTCAA CAATAGCCTC GGCGTTCGCT GTACGCTGCT GGGCGCATAT ACCGTCAAGC TGGTCAGTAC CCACCCTGAC GATGCCAATT GGCGCAGAAT GACAGCCACC GTCGGCGGCA CGCCCTACTA CCTGCAATAT CAGTTATATC GCACCGGGAA TATCGCCTGG ACCGAGACGA ACGATTACAG CGGGACGGGT TCGGGGATTA CACAGAGTAT CCCGTACACC GCTCGCATTA ACGCCAGTCA GGCCAGCAAG CCAGAGGGGG CGTATAAAGA TACCGTCACG ATCAACGTCA CAATTAACTA G
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Protein sequence | MLNPIPKIPF TFSANWQTIR WLRLPLLMMT FYYAPFGYAA CTTPPSNTTL GPYGSSVVGV NGSPQIVASG SGFRCTGSVL SLISPNTITA TIQSDSNPSG TTMRLRRGTS TDYVPYSLCM DSGCGTLYNI NSSYTWSRTT FLDILGLFNS TDGTMPIYIR TSTGNNISAG TYTDTVTIKW DYRLCALGAL GLCVYDEGST TSTLNITMNI TNDCQITNAP NISFGTAAFP ADFADVNNSL GVRCTLLGAY TVKLVSTHPD DANWRRMTAT VGGTPYYLQY QLYRTGNIAW TETNDYSGTG SGITQSIPYT ARINASQASK PEGAYKDTVT INVTIN
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