Gene PC1_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2813 
Symbol 
ID8133766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3186086 
End bp3186628 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content54% 
IMG OID644866101 
Producthypothetical protein 
Protein accessionYP_003018379 
Protein GI253689189 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATA AATATTCGCT GAATGACGAC GAATTACAGC TTTTTCGCAC GTCAATCACT 
GGCACAAAAA AGTTGCGTCA GGACACCTAT ACCCACAAAC CGCTGCGCAG GAAAATAGGC
GAATTACCGG CAAAACGGGC ATTGCAGGAG CAGGTTGATG CCAGTTTCTA TTTCTCGGAT
GAATTTCAGC CGCAGTTGGA TGCAGAAGGC CCTACGCGCT ATGTCCGTCC AGGCGCCAGC
CACTATGAAT TGAAGAAACT GCGACGGGGA GATTATTCAC CGGAGCTGTT TCTGGATCTG
CACGGCCTGA CGCAGCTTCA GGCGAAACAG GAACTGGGCG CGCTGCTGGC AGCTTGCCGT
CGGGAGCACG TTTACTGCGC CTGCGTGATG CACGGGCACG GCAAACATAT ACTGAAACAG
CAAACGCCGC TCTGGCTGGC GCAGCACCCC GATGTGTTGG CGTTTCATCA GGCCCCGAAA
GAATTTGGGG GGAATGCCGC GCTACTGGTA TTGGTGGCGC TGGAGGCACC TTCGCTTGAG
TAA
 
Protein sequence
MSNKYSLNDD ELQLFRTSIT GTKKLRQDTY THKPLRRKIG ELPAKRALQE QVDASFYFSD 
EFQPQLDAEG PTRYVRPGAS HYELKKLRRG DYSPELFLDL HGLTQLQAKQ ELGALLAACR
REHVYCACVM HGHGKHILKQ QTPLWLAQHP DVLAFHQAPK EFGGNAALLV LVALEAPSLE