Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2813 |
Symbol | |
ID | 8133766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3186086 |
End bp | 3186628 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644866101 |
Product | hypothetical protein |
Protein accession | YP_003018379 |
Protein GI | 253689189 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATA AATATTCGCT GAATGACGAC GAATTACAGC TTTTTCGCAC GTCAATCACT GGCACAAAAA AGTTGCGTCA GGACACCTAT ACCCACAAAC CGCTGCGCAG GAAAATAGGC GAATTACCGG CAAAACGGGC ATTGCAGGAG CAGGTTGATG CCAGTTTCTA TTTCTCGGAT GAATTTCAGC CGCAGTTGGA TGCAGAAGGC CCTACGCGCT ATGTCCGTCC AGGCGCCAGC CACTATGAAT TGAAGAAACT GCGACGGGGA GATTATTCAC CGGAGCTGTT TCTGGATCTG CACGGCCTGA CGCAGCTTCA GGCGAAACAG GAACTGGGCG CGCTGCTGGC AGCTTGCCGT CGGGAGCACG TTTACTGCGC CTGCGTGATG CACGGGCACG GCAAACATAT ACTGAAACAG CAAACGCCGC TCTGGCTGGC GCAGCACCCC GATGTGTTGG CGTTTCATCA GGCCCCGAAA GAATTTGGGG GGAATGCCGC GCTACTGGTA TTGGTGGCGC TGGAGGCACC TTCGCTTGAG TAA
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Protein sequence | MSNKYSLNDD ELQLFRTSIT GTKKLRQDTY THKPLRRKIG ELPAKRALQE QVDASFYFSD EFQPQLDAEG PTRYVRPGAS HYELKKLRRG DYSPELFLDL HGLTQLQAKQ ELGALLAACR REHVYCACVM HGHGKHILKQ QTPLWLAQHP DVLAFHQAPK EFGGNAALLV LVALEAPSLE
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